Thrips palmi (melon thrips): 117653059
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Entry
117653059 CDS
T08251
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03440
Homologous recombination
tpal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117653059
03460 Fanconi anemia pathway
117653059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117653059
03036 Chromosome and associated proteins [BR:
tpal03036
]
117653059
03400 DNA repair and recombination proteins [BR:
tpal03400
]
117653059
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117653059
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117653059
DNA repair and recombination proteins [BR:
tpal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
117653059
FA (Fanconi anemia) pathway
Downstream FA components
117653059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA2
BRCA-2_helical
BRCA-2_OB1
BRCA-2_OB3
BRCA2DBD_OB2
Tower
Motif
Other DBs
NCBI-GeneID:
117653059
NCBI-ProteinID:
XP_034254307
UniProt:
A0A6P9A8H9
LinkDB
All DBs
Position
Unknown
AA seq
2693 aa
AA seq
DB search
MEEDIDPFLDDEDSNGVGTQEVQSCSVDAENRFRENQTSPILSCSSSGVNSSQAGRRKGR
IRRSGSTFQKDHLSIPLDPSVESWKVPPCTPVESLLLSQDFQSDFVAPKTPVPVCIPFKS
ISPFNDAQSDDDIFASPTCDEQGINPSALNALFNGPEHSDLSWSMVTPSANQASNTSWSN
LNTEERKVLLPSDDFIVKPRALFLPDANDTADSWNMSSDAEGFVALKGQMASETPNYRRR
KNSLVSSVPVESPLATSIAAEDSCYATPDHKPRKICLEEVAGSPILSGSSEFSKSSRDEK
EEEDLFENEEECLVDMLPAGKAQDSKIAESTPHAGHKKETHADELNNLVTPHKHDLNNGE
SFLQDISVTALEKVCQAQELIDQAPPSTPEKQSETKRKRLLFSSNLSDTNHCTGTFKIPE
AKLKEKDQSSNQEKDNDNGHCIPDDSFMEHLAAMNTSIFSDNLQPITKVQSIKTSVSKMK
KFCYSADQNVGHKIVEALNTSEPKTLMKEILNSVIVLETTAAVTVKSKSVKASGDLVVFS
QLQEEISKDLQEGSIGIEGNESSVPALEENGPPSVMTSILSPCQGFQTGSGKQVELSEEA
LSKGLSLLKDCMEAVDTRPTDKINAPKTSPITSNVPEASKAQSTETNLSDDVAAEEIKQL
LQLVSDGEDFNPWHDTETISSPKSSKKDSLICPTSSKKSQNSPIQEREGFSTAGGKNIYV
SDENLARAEKLLLAPESASTSSDENLMSNKNPVGEKCNEHFDKSEGQCEQNEEIHRIQST
NDVSISRKRRFEKVPNIGSFIVPMKKSCLGIADSPSSSNQNTNNLLPSNKFQEDFPCVSE
AKTETIDKPLVNISQEAMNVVNNLIFNSSKPKDPPFMNRSEMGFSTASGGTINVSKNALD
KVKNLFDNLPADFETESCKKSSVEFSTNGLKSSLANKDIKISFPSKTDSTVPHNDVNQPE
NVSGHTVEELTTAYGFSTASGKKVDVTEKAMEQAKNLFDDLSEADSKLELRTCAPKQRRS
LGSFSKPSAQSTNKAQTPVAAAGSKSASSSHEELSKVKNMYDAIPRNPTGLQSKAGVRKV
RRSLGSVSKHGVIPTSKAQTPVLPNMDIETENGGFSKASGKAVSEEAMKTVKNIFEDISN
ELIPVLPSASSSNNVMVKRSSIDLVGFSTAGGKTLRVSEEALNKARNLFDDLPSESSSND
PKPSTASDSPVDMPGFYTAGGSAVQISKEALTKARTLFDDLPSEPSSRGAKSKTAKNPCV
AMTGFSTAGGSAVQISEEALNKAKTLFDDLPAEPSSRGAKSNIAKTPSVEMTGFSTAGGS
AVQISKEALNRAKNLFDDVPSESLVTDANASVTKRSSADMAGFSTAGGRAVQVSSEALNR
ARNLFDDLPSESLAIDAKSHASEKPMVKMAGFSTAGGKAVQISEEALNKAKNFFDDLPSE
SSSDDAKLSTTKKSSVDMAGFSTAGGSAIQISKAALNKARNLFDDLPSEPPNSDVKSSTA
KKLSVDMAGFSTAGGQAVQISKEALNRARNLFDDLPSESFETSAKSSSAKKPVAGSSTSG
ESANKENNFLHSSISKNNPVYHEMQKPSLTQEITESTAAILADDGFDLTRCVDVSEFSRP
SISTSPSMVTDRSSGLKPIVSSVPENKRNASEPSSPILSRSNNGSRKRCRRGRLSLSTNT
SSRTSPTWEICASSQDHHRTRLSLPSTVSSSSLASLCPTPDAVVESSKVLDRSSFNNATG
EANTNDIKLSSKLPPSRKLFSSESDLSPAKLNTPNAKINSNVPSHIECNESSSVTPDQRS
TPLSRPSHQNPLIRKALTKSLTTQSSGFKTPYKNDSKEQTKRSPSSPLQNPPEAKRMKPS
TNLYISHVFLSTPGQEKSNPRDLRPEVAEMRRRAAEEQKQVVDNYAEHKGELLRPCIGGW
LSRKINEKSCRKLMKMSAMGTPASCSHSELLSAGVRSSSIYITPANAASFRFSAWEYYSE
DVCRENVAGIPVGDGALLVLDAQGFMGLEEFQRAFLASPGVDPSLVPSGWFKNHYRWLVW
KLASLECHFPDQLGRQCFSPDVLMLQLKYRYDREIDRCERPALRRIFEHDDSAAKRMVLC
VSQILNRDDASSGLELELTDGWYSVIASVDQDMQYRVKKGTIKIGTKLIMHNAELMNCSE
GCFPLQVRDDVRLKLCSNSTRRARWYAKLGFQHNPGPINVPLGSILSSGGLVSCVTVYVA
RVYPLVFMEKTAEKTVVRSQRAESKEVAKCDKKREQLADKVYSQVQAELQQEQTKQKCSA
KKFALKHVATLTSGEDLSDILENASDPLSVQSLLTEEQKQILSNYQRARQDELRGELESR
VRSRLSDDANQERQVTPILKVRLFDEVNGNQSGAILSVWRPSEDMTSMFKEGHKLSIFSA
VANGVRCGELQLSANRSTRYNFDNTAEINSNLIRCVTPFTSLSLHGFVPRFGEVDIVGIV
IRISPAPQTAENPSHFQTAYLSDSHQNIVGIMFWGGMKEFGMDDLIVCRSFIAASNLQRR
GNPFVKAVPCVYASELSFFTTNPKQQYLKTAQQELRCSVSADLKTFCQECEDKLDDLLSR
KMSPAAGSKTPDSKSSVSKLVERNGVKVNAPNENSSLVSVQGQRKLSMEEQLKSPSASNI
LSPAVERRLASLERYGDSVPISPIFINQPRRSLRQDFKAPRRTDSPSVECKRD
NT seq
8082 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatatagacccgtttttggatgatgaagattccaatggagttggcacacag
gaggttcagagttgtagtgtagatgccgagaatagattcagagagaaccaaaccagcccc
attcttagctgctcaagttctggtgttaattccagtcaagctggacgccgcaaaggtaga
atacgaagatctggatcaaccttccaaaaagaccacttgtccatacctcttgatccttct
gtagagagttggaaagtgccgccatgtacaccagttgaaagtctgttgctttctcaagac
tttcagtctgactttgttgcaccaaaaacaccagtacctgtttgcataccttttaagagc
atctctcctttcaatgatgctcaatcagatgatgacatttttgcttcgccaacctgcgat
gagcaaggaattaaccccagtgctctaaatgcgctatttaatgggcctgaacactcagat
ttatcttggtccatggtaacgccttcagcaaaccaagcaagcaacacttcgtggtccaat
ctaaatactgaggaacgcaaggttttattacctagtgatgatttcattgtcaaaccccga
gcattgtttttacctgacgcgaatgatactgcagattcatggaatatgagctcggatgca
gaaggctttgttgccttgaaaggacagatggctagtgaaacacccaattacaggagaaga
aaaaattctctggtatcttctgtgcctgtagagagtcctcttgcaacaagtattgctgct
gaggacagctgttacgccactcctgaccacaaacctcgaaaaatctgcctggaagaagta
gcaggatcacccattctctcaggcagtagtgaattttccaaatcttcacgggatgagaaa
gaggaagaagatttattcgagaacgaagaggaatgtctcgttgacatgttgcctgctggc
aaagcgcaggattctaaaattgctgaatcaaccccacatgcaggacacaagaaagagacg
catgctgatgaacttaataatttagtgactcctcataaacatgacctcaataatggtgaa
tcgtttcttcaagatatttctgtcactgcattagaaaaagtatgtcaagcccaggagctg
attgaccaggctcctccctccactcctgaaaaacagtctgagaccaaaagaaaacgtctt
ttattttcatcgaacttaagtgatacaaatcattgtacaggaacatttaagattccagaa
gctaaactcaaagaaaaggatcaaagctctaaccaggagaaggacaatgataatggtcat
tgtatcccagatgactcattcatggaacatttggctgcaatgaacacctcaatattttca
gataatttacagcctatcacaaaagtgcagtcaatcaaaacatcagtctctaaaatgaaa
aagttttgttattctgctgaccaaaatgttggacataaaatagttgaagctttgaataca
agtgaacccaagacactaatgaaggaaatcctgaactcagtcattgtacttgagactact
gctgcagtgacagtcaaatctaaatctgtgaaggcaagtggagatctagtagtattctct
caactgcaagaggaaataagcaaagatcttcaggaaggctccattggaattgagggaaat
gagtcctccgtacctgcattggaagaaaatggacccccatcagtcatgacttcaatactt
tcaccttgccaagggtttcagacaggaagtggaaagcaggtcgaactgtctgaggaagcc
ctctctaaaggattaagtctattaaaggattgcatggaggctgtggacaccagaccaaca
gataagatcaatgctcctaaaacatcacccatcacttcaaatgtccctgaagctagtaaa
gcgcaatctactgagaccaatcttagtgatgatgtggctgcagaagaaatcaaacagctc
ttacagttagtcagtgatggagaagactttaacccatggcatgatacagagaccatatcc
tctccaaagtcctcaaagaaggatagcctcatctgtcctacaagttccaagaagtctcag
aacagcccaatacaagagagagaaggattttcaactgctggtggcaaaaacatttatgtg
tcagatgaaaaccttgcccgggctgagaagttgctattagcacctgaatcagcctctacc
agctctgatgaaaatttgatgtccaacaaaaatccagtgggtgaaaagtgcaatgagcat
tttgataaaagtgaaggccaatgcgaacaaaatgaggagatacataggatccaaagtact
aatgatgtttccattagtagaaagaggcgttttgagaaagttcctaacataggcagtttc
attgttcccatgaagaaatcctgtctgggcattgctgactctccttcctcttctaatcag
aacacaaacaatttactacccagcaataagtttcaagaagattttccctgtgtgagtgag
gctaagactgaaactattgataaaccattagtgaatatatcccaagaagcaatgaatgtt
gtgaataacttgatattcaattcttctaaaccaaaagatcctcccttcatgaatagatct
gaaatgggattttctacagcatctggggggacaataaatgtttctaaaaatgctctggat
aaggtgaagaacctgtttgataatcttcctgctgactttgagacagaatcttgtaaaaaa
agttcagtggaattttctacaaatggtttaaaaagttctcttgccaacaaagatataaaa
attagttttcctagcaaaactgattcaactgtaccacacaatgatgtaaaccagccagaa
aatgtttctggccatactgtggaggaattgacaacagcttatggtttttcaacagcttct
gggaaaaaggttgatgtaacagaaaaggctatggagcaggcaaagaatctgtttgacgat
ttatcagaggctgattcaaaactagaattaagaacctgtgcgcctaaacaacgtagatcc
cttggaagttttagcaagcccagtgctcaatcaacaaataaggcccaaacacctgttgct
gctgcaggtagtaaatcagcctcatcttcccatgaagagctgagtaaagtgaaaaatatg
tatgatgccattccaaggaatcctacaggattacagtcaaaagcaggtgtgcgcaaagta
cgaagatctctgggaagtgttagcaagcatggagtaataccaacaagtaaggcccaaaca
cctgttcttcccaatatggacatagagacagaaaatggaggtttctcaaaagcaagtgga
aaagcagtgtcagaagaggcaatgaaaacagtaaaaaatatttttgaagatatttcaaat
gaattgatccctgtccttccttccgcgtcttcaagcaataatgtcatggtcaagaggtca
tcgattgatttggtaggtttctcaacagcgggagggaagactctccgggtttcagaagaa
gctttgaataaagccagaaatttgtttgatgacctgccctctgagtcctcaagcaatgac
ccaaaacctagtactgctagtgactcccctgtagacatgccaggtttctatacagccgga
ggaagtgcagtccagatatctaaggaagctttaactaaagcaaggaccttgtttgatgat
ctgccttctgaaccttcaagcagaggcgcaaaatctaaaactgctaagaatccatgtgtt
gcaatgacaggtttctctacggccggaggaagtgcggtccagatatctgaggaggcttta
aataaagctaagaccttgtttgatgatctgcctgctgagccttcaagcagaggcgcaaaa
tctaatattgccaagactccatctgttgaaatgacaggtttctccacagcaggaggaagt
gcagtccagatatcgaaggaggctttaaatagagcaaagaacttatttgatgacgtaccc
tctgagtctttagttactgatgcaaatgccagtgttactaaaaggtcatctgctgatatg
gctggtttttcaacagcaggaggacgagcagttcaggtatcaagtgaggccttaaataga
gcaagaaatttatttgatgaccttccatctgagtctttagccattgatgcaaaatcccat
gcttctgaaaagccaatggttaaaatggcagggttttcaacagcaggaggaaaggcagtt
caaatatctgaagaagctttaaataaagcaaagaacttctttgatgacctgccttctgag
tcttcaagtgatgatgcaaaactaagtaccactaagaagtcatctgttgacatggcaggt
ttctctacagcaggaggaagtgcaatccaaatatctaaggcggctctaaataaagcaagg
aacttatttgatgacctaccatctgagcctcccaacagtgatgtaaaatcgagcactgcc
aagaagctatcagttgatatggcagggttttcaacagcaggaggacaggcagttcagata
tcaaaagaggccctaaatagagcaagaaatttgttcgatgacctgccttctgagtctttt
gaaaccagtgcaaaatccagttctgctaaaaagccagtggcaggtagttcaacctcagga
gaaagtgctaataaggaaaacaatttcctccactcttctatttcaaaaaacaacccagtt
taccatgaaatgcaaaaacccagtcttacccaggaaataactgaaagcaccgctgctatt
ttggctgatgacggctttgatttgactcggtgtgttgatgtatctgaattttccaggccc
tcaataagcacaagtccttcaatggtaactgaccgttcaagtggtttgaaacctattgtt
tcctcagttcctgaaaataaacgcaatgcaagtgaaccatcaagtcccattttaagtagg
agtaataatggatcccgtaaaagatgtcgaagaggcagacttagcctctccactaacacc
agctcaagaacatcaccaacctgggaaatctgtgcatcgtcacaggatcatcatagaact
cgtttatctcttccatccacagtctcttcaagtagcttagcatcactgtgtcctactcct
gatgctgttgttgaaagttcaaaagttttagataggtccagttttaacaatgcaactggc
gaggcaaatacaaatgacatcaaattaagttccaaattgccaccatctcgcaaattgttt
tcttctgagtctgatctgtctccagccaaactcaacacccccaatgctaagatcaattct
aatgtgccatctcatattgaatgtaatgagtcttctagtgtaacacctgatcaaagatct
actcctctttcaagaccatctcatcaaaatccattgataaggaaagccttgacaaagagt
cttaccacccaatcatcgggattcaagactccctataaaaatgacagcaaagagcaaaca
aaacgatctccatccagcccattgcagaaccctccagaggcaaagcgaatgaagccatca
acaaatctttatatttcccatgtgttcttgtctacacctggacaagaaaaatcaaatccc
agagacctgcgaccagaagttgctgaaatgcgaagacgagctgcagaggagcagaagcag
gttgtagacaattatgccgagcacaaaggtgaacttctccgaccttgtataggaggctgg
ttgtctcggaaaattaatgagaaatcctgcaggaagttaatgaaaatgtctgcaatggga
acccctgctagttgttctcacagtgagttattgtcagctggagtcaggtcttcatcaata
tatatcacacctgccaatgctgcaagttttcgtttttccgcatgggagtattacagtgaa
gatgtgtgccgagaaaatgtagctggcattcctgtcggagatggagcccttcttgtactt
gatgctcaaggtttcatgggtttagaggaattccaacgggctttccttgccagtccggga
gtcgatccttctttagtgccatctggatggtttaagaaccattatcgttggcttgtttgg
aagttggcatctttagagtgtcactttcctgaccaacttggacgacagtgcttttctcct
gatgttctgatgctgcagttaaaatatcgctatgatagagagattgaccgctgtgaaagg
cctgctctgcgacgtatttttgagcatgatgactctgcagctaagcgtatggtgttgtgt
gtttctcaaatattgaacagggatgatgcatcttccgggctagaattagagcttacagat
ggatggtatagtgttatagcatcagttgatcaggatatgcagtacagagtgaagaaaggt
acaattaaaattggtaccaagctcataatgcacaatgcagaacttatgaactgctccgaa
ggatgttttcctctccaggtacgagatgatgttagactgaaactatgtagtaattctaca
agacgggctcgttggtatgccaagttgggctttcaacataatccaggtccaatcaatgtg
cctttaggttctattctcagctcaggtggtctagtgagctgtgttacagtttatgttgct
agagtttatcctcttgtctttatggagaaaacagcagagaaaactgttgtgaggtcccag
cgtgctgaatcaaaagaagtggctaaatgtgataagaaacgagagcagttggcagataaa
gtttacagccaggtgcaagctgaactgcagcaagagcagactaaacagaaatgttctgct
aagaaatttgcattgaaacatgttgcaaccctcacatctggtgaagacttgtctgatatt
ttagaaaatgcatccgaccctcttagtgttcagagtctattaacagaggagcaaaagcaa
attctatctaactaccaaagggccaggcaagatgaattgcgtggcgagttggagtcacga
gtccgttcacggctatctgacgatgccaaccaagagagacaagttactcccattttaaag
gtgcgtctttttgatgaagtcaatggcaatcaaagtggtgctattctttctgtctggagg
ccctctgaagatatgacttcaatgtttaaagaaggacataaattgtctatttttagtgct
gttgcaaatggtgtgaggtgtggagagttgcagctatctgcaaacagatcaactcgctat
aattttgataacactgcagaaatcaattccaatctaattcgatgtgtgactccttttaca
tcattgtcattacatggctttgtaccccgctttggagaagttgatattgttggtattgtc
atcagaatcagtcctgcccctcaaactgcagaaaacccttcccattttcaaacagcttat
ctcagtgacagtcaccagaatattgttggaattatgttttgggggggtatgaaggaattt
ggaatggacgatctgatagtgtgtcgttcatttattgctgcttccaatttgcaacgcaga
ggaaacccttttgtgaaagctgtcccttgtgtgtatgcaagtgaactgtcttttttcaca
acaaatcctaaacagcaatatttgaaaactgctcaacaagaattgcgttgctctgtgtca
gctgatttgaaaactttctgccaagagtgtgaagataaacttgatgacttactttctcga
aagatgtctcctgcagctggctctaaaactcctgactcgaaatcatcagtctcaaaatta
gttgaaagaaatggtgtcaaagtaaatgcaccaaatgaaaactcttccttagtatctgtt
caaggccagcgcaagttatcaatggaagaacagctaaaaagtccgtctgctagcaatatc
ctttcaccagctgttgaaagaaggttggccagtcttgagagatatggagattctgttcca
atatcacctatattcattaatcaacctcggcggtccttgcgtcaagacttcaaagcacct
cgtcgaactgacagtccttctgttgagtgtaaaagagattga
DBGET
integrated database retrieval system
