Thrips palmi (melon thrips): 117653070
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Entry
117653070 CDS
T08251
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117653070
09123 Folding, sorting and degradation
03018 RNA degradation
117653070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117653070
03041 Spliceosome [BR:
tpal03041
]
117653070
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117653070
mRNA degradation factors
5'-3' decay
Lsm complex
117653070
Spliceosome [BR:
tpal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117653070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
117653070
NCBI-ProteinID:
XP_034254324
UniProt:
A0A6P9AAE0
LinkDB
All DBs
Position
Unknown
AA seq
90 aa
AA seq
DB search
MTSVTTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTEYEATP
EGRRITKLDNILLNGNNITMLVPGGEMPDS
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtaacgacaaatccctctactcttctgccattggagttggtggataagtgt
attggatctcgcattcacatcattatgaagaatgataaagaaatcgtgggaacacttctg
ggattcgacgactttgttaatatgcttttagaggacgtaacagagtatgaagcaaccccg
gagggaagaagaataacaaagttagataacatccttctaaatggcaacaatattaccatg
cttgtgccaggtggagaaatgccagattcataa
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integrated database retrieval system
