Thrips palmi (melon thrips): 117653141
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Entry
117653141 CDS
T08251
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117653141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117653141
Spliceosome [BR:
tpal03041
]
Complex B
Other components
Prp19-related factors
117653141
Complex C
117653141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_YTH1
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RRM_3
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
117653141
NCBI-ProteinID:
XP_034254456
UniProt:
A0A6P9AFR7
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MATSKSTSTYNRQNWEDAEFPILCQTCLGDNPYIRMTKDKYGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALRVKDDLPRSEVNKEYYIQN
MDREGGKLDVTSPTGAVGKSQAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGTNDPVADKLMRRADSMPKLEPPEDRSITTLYIGNLG
EKLGEKELRDHFYQYGEIRAITVVSRQQCAFVQFTQRQSAEQAAERTFNKLILGGRRLTI
KWGRSQGRQGVEGGDLGDDDEMLEPVPGLPGTLPPPPTDMRNNFFNLATPSAAASSEASL
MQPMMIPPPPMAPMGRPPPGLVPGGPPPLMQAQAPPGAAPGPPAPPSLRGTTPFYFPQIM
RPPPGVRPPHPPPMFPPGTAPMFPRSVGGAAGLVPPGTNAIHYPSQDPSRMGTAQLGSKD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccaaatcgacaagcacctacaacagacaaaattgggaagatgccgaattc
ccaattctttgtcagacctgtttgggtgacaacccctacattcggatgacaaaggataaa
tatggaaaggaatgcaaaatttgctccaggcctttcacagtcttccgatggtgtcctgga
gcaagaatgcggtttaagaaaacggaagtttgccagacctgtagtcgcttgaagaatgtg
tgtcaaacatgccttctagatttggagtatggtctgcctattcaagtcagagatgctgct
ctccgtgtcaaagatgaccttcctcgttcagaagttaacaaggaatactatatccaaaat
atggatagagagggtggaaagttggacgtgacatcaccaactggggcagttggcaaatcg
caagcagccagtgatcttcttatgaagttggctcgcacaagcccttattacaaacgaaac
cgacctcacatctgttcattctgggtcaaaggagagtgtaaacgaggtgaagaatgccct
tatcggcatgaaaagcctactgatccagatgatccattagcagatcagaatatcaaagac
aggtactatggtacaaatgaccctgttgctgacaagttaatgagacgagctgactccatg
cccaaactggagcctccagaagatagaagtatcacaacgctttacattggcaatttagga
gagaaacttggagaaaaggagctgcgggatcatttctatcagtatggtgaaattcgtgcc
atcactgtggtgagccggcagcagtgtgcctttgtgcaatttacacagcgtcagtcagcg
gagcaggcggcagagaggactttcaacaagctgatcctcggcggcaggaggctgacaata
aagtggggacggtcccagggccgccagggcgtcgagggcggcgacctgggcgatgatgac
gagatgctggaacctgtgccaggcctgcccggaactttgcctccacccccgactgacatg
cgcaacaacttcttcaaccttgcaacgccatcagcagctgcgtcctctgaggccagcctg
atgcagccgatgatgattccacccccgcccatggctccgatgggccggccgccaccgggc
ctcgtccccggcggtcctcccccactgatgcaggcccaggccccaccgggagccgctcct
ggccccccagcaccgcccagtctgaggggcaccactccattctacttccctcaaatcatg
aggcctccgcccggggtgcggccgcctcacccgccccccatgttcccgccaggcactgct
cccatgttccctcgctctgtgggtggagcggccggcctggtgccgcccggcacgaacgcc
attcattacccctcacaggatccctcgaggatgggaacggctcagctgggcagcaaggat
tga
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