KEGG   Thrips palmi (melon thrips): 117653141
Entry
117653141         CDS       T08251                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117653141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpal03041]
    117653141
Spliceosome [BR:tpal03041]
 Complex B
  Other components
   Prp19-related factors
    117653141
 Complex C
    117653141
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_YTH1 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH zf-CCCH_4 RRM_3 zf-CCCH_10 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 117653141
NCBI-ProteinID: XP_034254456
UniProt: A0A6P9AFR7
LinkDB
Position
Unknown
AA seq 480 aa
MATSKSTSTYNRQNWEDAEFPILCQTCLGDNPYIRMTKDKYGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALRVKDDLPRSEVNKEYYIQN
MDREGGKLDVTSPTGAVGKSQAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGTNDPVADKLMRRADSMPKLEPPEDRSITTLYIGNLG
EKLGEKELRDHFYQYGEIRAITVVSRQQCAFVQFTQRQSAEQAAERTFNKLILGGRRLTI
KWGRSQGRQGVEGGDLGDDDEMLEPVPGLPGTLPPPPTDMRNNFFNLATPSAAASSEASL
MQPMMIPPPPMAPMGRPPPGLVPGGPPPLMQAQAPPGAAPGPPAPPSLRGTTPFYFPQIM
RPPPGVRPPHPPPMFPPGTAPMFPRSVGGAAGLVPPGTNAIHYPSQDPSRMGTAQLGSKD
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcgacgtccaaatcgacaagcacctacaacagacaaaattgggaagatgccgaattc
ccaattctttgtcagacctgtttgggtgacaacccctacattcggatgacaaaggataaa
tatggaaaggaatgcaaaatttgctccaggcctttcacagtcttccgatggtgtcctgga
gcaagaatgcggtttaagaaaacggaagtttgccagacctgtagtcgcttgaagaatgtg
tgtcaaacatgccttctagatttggagtatggtctgcctattcaagtcagagatgctgct
ctccgtgtcaaagatgaccttcctcgttcagaagttaacaaggaatactatatccaaaat
atggatagagagggtggaaagttggacgtgacatcaccaactggggcagttggcaaatcg
caagcagccagtgatcttcttatgaagttggctcgcacaagcccttattacaaacgaaac
cgacctcacatctgttcattctgggtcaaaggagagtgtaaacgaggtgaagaatgccct
tatcggcatgaaaagcctactgatccagatgatccattagcagatcagaatatcaaagac
aggtactatggtacaaatgaccctgttgctgacaagttaatgagacgagctgactccatg
cccaaactggagcctccagaagatagaagtatcacaacgctttacattggcaatttagga
gagaaacttggagaaaaggagctgcgggatcatttctatcagtatggtgaaattcgtgcc
atcactgtggtgagccggcagcagtgtgcctttgtgcaatttacacagcgtcagtcagcg
gagcaggcggcagagaggactttcaacaagctgatcctcggcggcaggaggctgacaata
aagtggggacggtcccagggccgccagggcgtcgagggcggcgacctgggcgatgatgac
gagatgctggaacctgtgccaggcctgcccggaactttgcctccacccccgactgacatg
cgcaacaacttcttcaaccttgcaacgccatcagcagctgcgtcctctgaggccagcctg
atgcagccgatgatgattccacccccgcccatggctccgatgggccggccgccaccgggc
ctcgtccccggcggtcctcccccactgatgcaggcccaggccccaccgggagccgctcct
ggccccccagcaccgcccagtctgaggggcaccactccattctacttccctcaaatcatg
aggcctccgcccggggtgcggccgcctcacccgccccccatgttcccgccaggcactgct
cccatgttccctcgctctgtgggtggagcggccggcctggtgccgcccggcacgaacgcc
attcattacccctcacaggatccctcgaggatgggaacggctcagctgggcagcaaggat
tga

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