Thrips palmi (melon thrips): 117653272
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Entry
117653272 CDS
T08251
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117653272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117653272
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117653272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
AAA_14
NPHP3_N
RNA_helicase
AAA_28
AAA_2
Mg_chelatase
TIP49
ABC_tran
AAA_18
Vps4_C
AAA_17
Rad17
nSTAND3
Cytidylate_kin2
ATPase
IstB_IS21
TsaE
Viral_helicase1
AAA_7
AAA_19
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117653272
NCBI-ProteinID:
XP_034254732
UniProt:
A0A6P9A9L4
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MTSSGEVIALEGAGAGADPIIFKTNFKPKKHLKHRPYFMDPAIVPRVKQYLEENKDKVYV
DIDDMVTALQRKYREYGKKKRMAFKSIVEKAFSVVLKNYSLNDDELQNALGSESSSDMEI
ESDDEVDLIVDTNNSSNDQIVNMYLQQQPQKSIRKHNNEGAKELIDISSDDEDQVPAKRS
KQADTTSNSEPIVPLPQIPQSPKTTNGHATPKEVAVTRDVTITAVPPATVAPVVASTVPS
VAPSVTPSVVPERPKRKRPVADGGASSTPSLNGDVSKRRKDFPVTRPCCSFKDVGGSTKV
LQEVCKLLVHLQHPEIFEQIGVTPPRGFLLHGPPGCGKSLLANAIAGELQIPMLKVAAPE
IVAGVSGESEERIRDLFDQAASIAPCVLFIDEIDAITPNRNNAQREMERRIVAQLLTTLD
ELSEKEGGNQVLVVGATNRPDSLDPALRRAGRFDREVCMGIPDQGARAHILRVVCGRLAL
APEVSSDAGINELASLTPGFVGADLASLTREAAMVAVNRVFSQLEAKEKEGKEADIKEAK
EKEADIQVQPQTIVPEGNDKIEGPSEILETESKVDNCDKDNSVVDQEAMDTSEVVQITTS
TENIPEVAPESSDTVTLMEGDNETVLTGEAVVENNAIYEEVKIDEAVITEEQNENVEKET
IVDGDKAGESIIPPQTDAPLLSTEVVDITPENSNKLQNVSQKPHDDIEVMEVAVASGGDE
TPKPSVNQSDEVKEKELALSQKLQPLSIWSPELCQLMAWLHNSPLTAAQLGDLTITMSDF
HEALHHVQPSAKREGFATVPDVTWEDVGSLANVRAELQLCVLAPVRYAEQYSQLGLNAPT
GVLLCGPPGCGKTLLAKAVANEAGINFISVKGPELLNMYVGESERAVRQVFQRARNSAPC
VIFFDELDALCPRRSDSGDNGVSSRVVNQLLTEMDGVEGRSAVYLMAASNRPDIIDPAVL
RPGRLDKIIYVGLPNAEDRKDILRALTKNGTKPLLASDVNLSEIASRVELEGYSGADLAA
LVKEAGVHALREFIATGENPQAGPLSVAIKHFNSAAAKIRPSVTGKALKHYEKLKEMYGT
PSPEEKPKPTETS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctccggcgaagtgatagcccttgagggcgccggggccggcgcagaccccatc
atcttcaaaaccaacttcaagccgaagaagcacttaaagcatcgcccgtatttcatggac
ccagccatagtgcccagagttaaacagtatttagaagagaacaaagataaagtatatgtt
gacattgatgatatggttactgctctccaacgaaaatacagagagtacggaaagaagaaa
cgaatggcgtttaaaagtattgttgagaaagctttttctgttgtgttaaagaattacagt
ttaaatgatgatgagctgcaaaatgctcttggatcagaatcatcaagtgacatggaaatt
gaatcagacgatgaagttgatcttattgttgatacaaacaattcaagtaatgatcagatt
gtaaacatgtacttgcagcagcaacctcaaaagtctataaggaaacacaacaatgaagga
gctaaagaactgatagacattagcagcgatgatgaagaccaagtgcctgccaagcggtct
aaacaagcagatacaacaagcaacagtgaacctatagtgcctttaccccaaattcctcag
tctcccaaaactacaaatggacatgccactccaaaggaagttgctgtaactcgtgatgta
actattactgccgttccccctgccactgttgcacctgttgttgcctctactgttccttcc
gtcgctccttcagtcaccccttcagttgtaccggaaagaccaaaacggaagcgtcccgta
gcagatgggggtgctagctcaacaccctctctcaatggtgatgtgtccaaaaggaggaaa
gactttcctgtcacacgtccttgttgttctttcaaggatgtaggagggagtactaaagtt
ctccaggaagtatgtaaattactagtgcatttacaacatcctgagatttttgagcaaatt
ggtgttactccacctcgtggatttctacttcatggccctcccggctgtggcaaaagtctt
ctcgcaaatgcgattgctggtgaacttcaaattcccatgttgaaggttgcagccccagaa
attgttgcaggagtttctggtgagtcagaagaacgaatacgtgatctctttgaccaagct
gcatctattgccccatgcgtacttttcattgacgaaattgatgctataactcccaatcga
aataatgcccagcgtgaaatggaacggcgcattgttgcacaacttttaaccactttggat
gagcttagtgagaaagaaggtggaaatcaagtgttggttgttggcgcaacaaaccgccca
gattctctggaccctgctctaagaagagctggtcggtttgatcgagaagtttgtatgggt
attcctgaccagggagcaagagcccacattttgagagttgtttgcggtcgtttggcatta
gccccagaggtatcctctgatgctggcatcaatgagctggcatctctcactcctggcttt
gttggtgcagatcttgcctcattgacccgagaagctgctatggttgctgttaacagagta
ttttcccagctagaagcaaaagaaaaggaaggaaaggaagctgacattaaagaagcaaaa
gaaaaggaagcggacattcaagttcaacctcagaccattgtacctgagggcaatgataaa
attgaggggccatcagaaattttagagactgaaagcaaagtggacaattgtgacaaagac
aactcagtggttgatcaagaagcaatggatacctctgaagtggttcaaattacaacatca
accgaaaacataccagaagttgctcctgagtcgtcagacacagtaactttaatggaggga
gataatgagactgttttaactggggaagcggtggttgagaataatgcaatatatgaagag
gtgaagattgatgaggctgtcataacagaagagcagaatgaaaatgtggaaaaagaaact
attgttgatggcgataaggcaggagaaagtatcattccaccccaaacagatgctccctta
ctatcaacagaggttgtcgatataactcctgagaacagcaataaacttcaaaatgtcagt
caaaaaccccatgatgatattgaagttatggaggtagcagttgccagtggtggtgatgaa
acaccaaagccttctgtgaatcaatcagatgaggttaaagagaaagagttggcactttca
caaaagttacagcctttatccatttggtcaccagagctttgccagctgatggcctggctt
cacaactctccccttacagcagcacagctgggcgacctgacaatcactatgtcagatttt
catgaggctcttcaccatgtacaaccgtccgccaaaagggaaggttttgccactgttcct
gatgtaacttgggaggatgttggctctttggctaatgtcagggcagaattgcaactgtgt
gtcctggcacctgtaaggtatgcagagcagtactctcagctgggactgaatgcgccgact
ggtgtgttgctgtgtggacctcctggatgtggtaaaactcttcttgcaaaagcagtggct
aatgaggctggcataaacttcatttctgtcaagggacctgaacttctaaacatgtatgtt
ggtgaaagtgagcgtgctgttcgtcaagttttccagagggcacgaaattctgctccttgt
gtgatcttctttgatgaacttgatgccctctgtccaaggcgttcagactccggtgataat
ggagttagcagcagggttgtgaatcagcttttaacagaaatggatggtgttgaaggcagg
tcagctgtgtacctgatggctgcatctaaccggcctgacataatagacccagcagttttg
agaccaggccgactggacaaaataatttatgtgggattgccaaatgctgaagatcggaaa
gatattttaagagcattaaccaagaatggaacaaagcctctgttggcttctgatgttaat
ttatcagagattgcaagcagagttgaattggagggttactcaggtgctgatttggctgct
cttgtaaaagaagcaggtgttcatgcattgcgagagttcattgcaacaggagaaaatcca
caagctggtcccctttctgtagccatcaaacatttcaactcagctgcagccaaaatcagg
ccatcagtgacaggaaaggctctgaagcattatgaaaagctcaaggagatgtacggcacc
ccttcacctgaagaaaaacctaaacctacggaaacgtcttaa
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