Thrips palmi (melon thrips): 117653287
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Entry
117653287 CDS
T08251
Name
(RefSeq) protein lethal(2)denticleless
KO
K11790
denticleless
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117653287
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117653287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR11_1st
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_SCAP
Peptidase_S9_N
WDR54
Motif
Other DBs
NCBI-GeneID:
117653287
NCBI-ProteinID:
XP_034254765
UniProt:
A0A6P9ABB3
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MNIVDALNVREQGKRTWSDYRIALRRLKCHDYDEFRGIVPSTEGPDFNPEPPVFACTFCT
TPKNEHLLALANEDGKIALQNTNLRSDHNPFEGHQAHHNAIFDIAWAPGEMKLVSASGDH
TAVLWDVQESGNFQEVARFHAHTRSVKTVAFPHDDKMMFATGARDGVIMLWDTRIQRNQL
AIRPDNFISNSHSAPGTPGNTSGGRNRRTKPTPSRASSITGLAFQDAHSLISCGAGDGKV
KVWDIRKSYSTYRREPQPQYSMSTPNGSGRSGFTCLALDPSRLKLYASCMDNTIYCYNVS
TYEEQPVSLFKGHKNSTFYVKACLSPDGRYLLSGSSDEHAYIWDTSSKKGEVYLPIVKLV
GHNAEVTSVAWCPIGEVKIVTCSDDARHCMWRVGQEFRGDNHQVELHGWAEDFADGRSEA
DPSTPATPITPSFTSWRRWTPCVQRTPDNEVEQPSAPCTQCHRLSTPCLRCIATRAPLPL
SAPHGSKKRLEVLWEEDSSCPECVKEARPILNQVPDNVAGPGRGARRLFSPARKHSADEV
DLADTLGQSPSKKPHMEPIGSLKRPHPDDAASSSCPSSPKKHCTLLDTATARRTSPRKRC
HPSEMMSPQKKFKVNENASCSKDETSAVGSGVTAEASHQVSSFCSPKKDKKTSSVEDQNV
LPGSSSSPRKPLDTPSKRRISDRRTDSPHKRLPHNDDLQGIGKIEDAVSQTTQIVPKKLC
ARHSRMGFNSPTLNLPNYVLDGTSPHHRCSPGVHHKENVDWLTRLRRERNSTDKKEPESA
SDQDAVVHSSNSRRTPSQTTPGKGAPSRATPARASLSRVTPAKSSSRTTPGKGSSSRMAP
VTPGSSQSASTQTNRKTPSRRSSNSDPSASGSSSNGASTSLLKFFRVSDKSKEQQCSRVN
PPAKPFTSVVS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtcgacgctctcaacgtacgggaacaaggaaaaagaacttggtctgactac
aggattgcactcagacgtttgaagtgccatgattatgatgagttccgaggaatagtaccg
agcacagaaggcccagatttcaacccagaacctccagtgtttgcttgtacgttttgtacc
actcctaaaaatgagcacttgctggccttggccaacgaagatggtaaaatcgctctccaa
aacacaaatctacgcagtgatcacaacccatttgaaggtcaccaagcccatcacaatgcc
atatttgacattgcatgggcaccaggagaaatgaagttggtcagtgcctcaggagatcac
actgccgttttgtgggatgtgcaagaatcaggtaactttcaagaagttgcccgattccat
gcgcacacaagaagcgtcaaaacggttgctttcccccatgatgataagatgatgtttgct
actggtgcaagagatggagtcatcatgctttgggatactcggattcaaaggaatcaactt
gctattcggcctgacaatttcatcagtaactcgcacagtgcccctggaactcctggaaat
acatcaggaggtcgcaatcgcaggactaaaccaacaccttctcgagctagcagtataact
ggacttgcttttcaggatgctcacagtctcatatcctgtggggctggtgatggaaaagtg
aaagtgtgggacatcaggaaaagctattcaacttatcgacgtgagccacaaccacaatat
tcaatgtcaacccctaatgggtctggcagaagcggttttacatgtttagctctagaccca
agtagactcaagttgtatgcatcatgtatggacaacacaatttattgttacaatgtttct
acttatgaagaacaacctgtgtccttattcaaaggccataaaaatagcacattttatgtc
aaagcatgtctcagtccagatggacgatacctgctgagtggttccagtgatgagcatgcc
tacatttgggacaccagcagcaagaagggtgaagtttacttgcctattgtgaaacttgtt
ggccacaatgctgaagttacaagtgttgcttggtgccccataggagaagtaaagattgtg
acctgctcagacgatgcgaggcattgcatgtggagggtgggtcaagagttcagaggagac
aaccaccaagtcgaactgcacggctgggccgaggactttgctgatggccgttcggaggcg
gacccttccactccagccaccccaatcacgcccagcttcacgtcgtggcgtcggtggact
ccgtgtgtccaaaggactcccgacaacgaggtggagcagcccagtgcgccttgcacccag
tgccatcgcctgtccactccctgcttgcgctgcatcgccaccagagcgcccttacctctc
tctgctccccacggctccaagaagcgtctggaagttttgtgggaggaggatagcagctgt
ccggagtgtgtgaaggaggcccgtcccattttaaaccaagttcctgacaatgtagctgga
ccaggccgtggtgcccggcgtttgtttagcccggctagaaagcactccgccgatgaggtt
gacttggctgatacactaggtcaaagtccctcgaagaagccccacatggaaccaattggt
tccctgaagagaccgcacccagatgatgctgcctcttcatcgtgtccatcaagcccaaag
aagcactgcacgttgctggatactgctaccgccagaagaactagtcccaggaagagatgt
cacccttctgaaatgatgagcccccagaaaaaatttaaagtcaatgagaacgcaagctgt
tctaaggatgaaacatcagctgtcggaagtggagtgacagcggaagcatcccatcaagtg
tcttcattttgcagtcccaaaaaagataagaaaacttcgtctgtggaggatcaaaatgtt
ctaccagggtcaagttcttcacccaggaaaccccttgacaccccatctaaaaggaggatc
agtgatagacgaactgacagtcctcataagagactcccgcataatgatgacttgcagggt
attgggaaaatagaggatgctgtcagtcaaactacgcaaattgtaccaaaaaagctttgt
gcccgtcacagtaggatgggtttcaactctccgacattgaacttgcccaactatgttctg
gatggtacttcaccgcatcacaggtgttcgccaggtgtccaccataaggaaaatgtggac
tggcttaccagacttcgcagagagaggaattccactgacaagaaagagcctgagagtgcc
tcagatcaggatgccgttgtacattcatcaaattcaagaagaacccccagccagaccact
cctggcaagggagccccaagtagagccacaccagcaagagcgtccttgagccgagtgact
cctgcaaagagttcaagccgaacaacacctgggaaaggttcttccagccgcatggcccca
gtcacacccggctcttctcaaagtgcatcgactcagaccaatagaaaaacaccttctagg
cgttcatctaattctgatccttctgcaagtggcagcagctctaatggagcatcaacaagt
ttgcttaaatttttccgtgtctcagataaatcaaaagaacagcagtgttcccgtgtcaac
ccaccagccaaaccttttacctctgttgtttcctag
DBGET
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