Thrips palmi (melon thrips): 117653499
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Entry
117653499 CDS
T08251
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117653499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117653499
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117653499
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117653499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
117653499
NCBI-ProteinID:
XP_034255084
UniProt:
A0A6P9ACG4
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MNNETLVCVPGQRLSIADKSHLSGRGTYERLGYIYATLAGVVKVVKQDKASLIEVRSSNE
QSIVPAPGDIVTAKITLVKQRFCKCIIKCIGDTVLSRPYRGMLRKEDVRATEKDKVEMIK
CFRPGDIILARVLPMTEVHSYQLSTAEDELGVVLADSEEGMSMVPVSWTEMQCPKTHIKE
LRKVAKVLPERLSTV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaaacgctcgtctgtgtcccaggccaacggctcagtatagctgacaaaagc
catttgtcaggtcgtggcacatacgaacgcttaggatacatttatgcgactctagctggt
gttgtgaaggttgtaaaacaagacaaagcttctttgatagaagtgcgcagttctaatgaa
caaagtatagtccctgctcctggggatatagtgacggctaagatcacattagtgaagcaa
cgtttctgcaaatgtattataaagtgtataggcgacactgtgctatctcgtccttatcga
ggcatgctgcgcaaggaagatgtgcgagcaacagaaaaagacaaagttgaaatgattaaa
tgcttccgtccaggagacattattttagccagagttttacccatgactgaggtccattcc
taccagctttctactgctgaagatgaactaggagtggtgttagctgacagtgaagaggga
atgtccatggtgccagtgagctggacagagatgcagtgccctaagacacacataaaagaa
ctgaggaaggtggctaaagtactaccagaaagacttagtactgtgtaa
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