KEGG   Thrips palmi (melon thrips): 117653499
Entry
117653499         CDS       T08251                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117653499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpal03019]
    117653499
Messenger RNA biogenesis [BR:tpal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117653499
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     117653499
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 117653499
NCBI-ProteinID: XP_034255084
UniProt: A0A6P9ACG4
LinkDB
Position
Unknown
AA seq 195 aa
MNNETLVCVPGQRLSIADKSHLSGRGTYERLGYIYATLAGVVKVVKQDKASLIEVRSSNE
QSIVPAPGDIVTAKITLVKQRFCKCIIKCIGDTVLSRPYRGMLRKEDVRATEKDKVEMIK
CFRPGDIILARVLPMTEVHSYQLSTAEDELGVVLADSEEGMSMVPVSWTEMQCPKTHIKE
LRKVAKVLPERLSTV
NT seq 588 nt   +upstreamnt  +downstreamnt
atgaataatgaaacgctcgtctgtgtcccaggccaacggctcagtatagctgacaaaagc
catttgtcaggtcgtggcacatacgaacgcttaggatacatttatgcgactctagctggt
gttgtgaaggttgtaaaacaagacaaagcttctttgatagaagtgcgcagttctaatgaa
caaagtatagtccctgctcctggggatatagtgacggctaagatcacattagtgaagcaa
cgtttctgcaaatgtattataaagtgtataggcgacactgtgctatctcgtccttatcga
ggcatgctgcgcaaggaagatgtgcgagcaacagaaaaagacaaagttgaaatgattaaa
tgcttccgtccaggagacattattttagccagagttttacccatgactgaggtccattcc
taccagctttctactgctgaagatgaactaggagtggtgttagctgacagtgaagaggga
atgtccatggtgccagtgagctggacagagatgcagtgccctaagacacacataaaagaa
ctgaggaaggtggctaaagtactaccagaaagacttagtactgtgtaa

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