Thrips palmi (melon thrips): 117653615
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Entry
117653615 CDS
T08251
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117653615
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
90S particles
Other 90S particles
117653615
Pre-60S particles
Other pre-60S particles
117653615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Ltn1_1st
Aip3p_Bud6_N
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
117653615
NCBI-ProteinID:
XP_034255302
UniProt:
A0A6P9AB08
LinkDB
All DBs
Position
Unknown
AA seq
1352 aa
AA seq
DB search
MTKIRTRVKGKGKRWLKGQSSISNPESKKFRDAARSRFFQENLATESKLTSDALRKHDAF
MGTKPEPLEVDGEESETAYSASGKSFKTFQTFASDWSSCSNVSFSKFLNQFTSNSALHKE
MLAVLAAITEVIKSNGGSESSTEYFAALMTSLGVSESEDSLGAVLTLLGMGIKSVPENVL
KKKFSEASKTFMDLLIRFAESDNHVILRSVIGCLSVLLRSQEAVVWKNSSTVQVLDSILA
FTTHSKPKIRKAAHHAVCVILKSETDSSKSDSHPAAPHVAKFCVRSLENSVGSAASQTIL
LHTLVLVKETISTFPKQHLKTVAETVLKVMTLNNVLVSSCGMQALHSLFVSRPSAVILPA
TLNAQLISALYDYQPPVSDAQPTLAWLAVMQEAHVNLGKQDLSMCCAHLPKLFTTVSQIW
LSDKPDILSNATHALSAVISDCLKEAAAPAVVERYSTTISKVFSVLQDGLKYQYHSAWKH
VIHLLAAFFEHCGPTCESLVIPCISALGELQDSYQFTCVHEVDHALGKAVQFMGPKAVLK
AIPLQVTGAEVNSQIKRSWLLPILRESIRDTQLSFFVEYFLPLAGVSWKTSKDLAAQGRK
AESVVYELFQAQVWALLPSFCNHATDIKDSFKSLAKILGTLITDRKDLRLSVMTALRRLI
IHSQEGEPSSKKEEDLRELGRFAKNYLPILFNLYTTKTNGSEEEGHRLSAFETIKVYLSI
ADPVLQNELFVKAFQKLKSGVVDKFVKESVMDLLRILVPYQSSENILTLYSLIKEGIADS
KNSRLQKKSYRLLEILCSSSSETCISFQNENIQDVQKLLLQSLSSSATSSRGARLRCLIH
LVRRLPASKFNIIKLIVPEAVLCVKDINERCRQAAFALLHELGLTMFRWQEEEVGPDNAV
TVEQEHKVMKDFMALLLAGLAGTAQLTRCTLLALADVTHHFKAKFPMDLLELLLQNVCVL
ATSSSREVAGAAVSFLKQVVYSFPTTTVGPFVPTIMKAIVTMTDDCKKHFRRETQHMLDR
MIRRYGCDAIERQVPGSDQIMLKRIRNLRKLHARKERLRAERLKNKLAVDDSEDEDFTIK
ARAKTIEEILAESDDELDLDQNEASKGGKKKSQAWIKEEPGDIIDLADSMAASKISASRP
NVATGSNAAKQSKKVKDRGFKTAEDGRLIIDDKGSDDEETEGERKFKSSRRIPTISDSES
DEDMDADGNDDGDAKSTKSGVTAKGRKRKLSNSDARSTTTAGPNDKYKTGGSGIHRPVGK
AMSVKSGVSAKTAKSGKSTTSTAYGAEYRAKKARGDVKKGGAPDPYAYVPLNRGLLNKRK
RLKQEGQFKGLVRAARKGAAAGRVAKVRKTRK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaattagaacacgggttaaagggaagggaaaacgatggttgaaaggccagagt
tctatctcaaacccagaatcaaagaagtttcgtgatgctgctcggtcaagattcttccag
gaaaatttagcgactgagagcaaattgacttctgatgccctgcgcaaacatgacgccttc
atgggaacaaagcccgaacctttggaggtggatggggaagaaagtgagacggcttactca
gcatcaggaaagtcttttaagaccttccaaacttttgcaagcgattggagctcctgttct
aacgtttccttttctaagtttttgaatcaattcacttcaaactcagcattgcacaaagaa
atgctcgcagttcttgctgccatcacagaggttatcaaaagtaatggtggctcagaatca
tcaacagagtacttcgctgccttgatgacaagccttggtgtgagtgagtctgaggactct
ttgggtgcagttttaacactgctcggaatgggcattaaaagcgttcctgaaaatgtacta
aaaaagaaattttcagaagcgtctaaaactttcatggacctcttgattcgcttcgctgaa
tctgataatcatgttatactacgatccgtgattggatgcttgagtgtcctccttcgcagt
caagaagcagtggtttggaaaaactcatccactgttcaggtgctggattccatcctagct
ttcaccacacattcaaagcccaagattcgtaaagcagcacatcatgcagtttgtgtcatt
ttgaagtcagagactgattcctccaagagtgatagtcacccagctgcacctcatgtggct
aaattttgtgttagatcccttgaaaattctgttggatccgcggcatcgcagactatcctt
ctacacactctagttcttgtcaaagaaactatttcaacctttcctaagcagcatctcaaa
actgttgcagagaccgtcttgaaagtgatgaccttgaacaatgtgttggtcagctcttgt
gggatgcaggcacttcattctctttttgtgtctcgaccatctgccgttatcctgcctgca
actctcaatgcacaacttatttcagctttgtatgattatcaacctcctgtgtcagatgcg
cagccaactctcgcatggctagcagtgatgcaagaggcccacgttaatctgggaaaacaa
gatctctctatgtgttgtgctcatttaccaaaactcttcaccacagtgtctcaaatttgg
ttgtcggacaagccagatattctcagcaatgcaacacatgctctttctgctgttattagt
gactgtcttaaagaagcagctgctccagctgttgttgagcggtattccacaaccatatca
aaggtctttagtgttctgcaggatggtttgaaatatcaataccacagtgcatggaaacat
gtaattcaccttctagctgccttctttgagcattgtggtccaacctgtgaaagcctagtc
atcccctgcatttcagctttgggtgaacttcaagactcataccagttcacttgtgttcat
gaagtagaccatgctcttggaaaggctgttcaattcatgggcccaaaggctgtcttgaaa
gctattcctctgcaggttactggtgcagaggtaaacagccaaattaagcgtagttggctt
ctccccattctcagagaatcaatacgcgatacacaattgagcttcttcgtagaatacttc
cttccattggcaggcgtcagttggaagacatccaaggatcttgcagctcaaggaaggaaa
gcagagtcagtggtgtatgaacttttccaagctcaagtttgggctttgctacccagcttc
tgcaatcacgccactgatattaaggattctttcaagagtcttgccaaaattcttggtacc
ttgattactgaccgcaaagacttgcgtctctctgtaatgactgcacttcggaggctgatt
attcacagtcaagagggcgaaccatcatcaaaaaaagaggaagatttgcgtgaactgggt
cggtttgccaaaaattacttgcctattctgttcaatctgtacaccactaaaactaatggc
tctgaagaggagggccatcgcctttctgcatttgaaacaatcaaggtttacttgtcaata
gctgatccagtcttgcaaaatgagctttttgttaaagctttccagaagctgaaaagtggt
gttgttgacaagtttgtcaaagaaagtgttatggatctgttgaggattcttgttccttac
cagagctctgaaaatattttaacattgtacagtcttattaaggagggaattgctgattct
aagaatagccgtctccaaaagaaatcttacaggctgcttgaaattttgtgttcctcttcc
tcagaaacttgtatttctttccaaaatgaaaatattcaggatgttcagaagcttctgttg
cagtcgttatcatcatcagccactagcagtcgtggtgcccgattacgttgcttgattcac
cttgtacgaagattaccggcctcaaaattcaacattattaagctgattgtccctgaagct
gttctatgtgtgaaagacattaatgaacgttgtcgacaggctgcttttgccctcctccat
gaactaggattgaccatgtttaggtggcaagaggaagaggttggccctgacaatgctgtc
actgtggaacaagagcacaaagtaatgaaagatttcatggctttgctcctagctggtctg
gcaggcactgcacaacttactaggtgcacacttcttgctttggctgatgtcactcatcat
ttcaaagctaaattccctatggatctcctggaattactgttacaaaatgtttgtgtcttg
gcaacttcatctagtcgggaagttgctggggctgccgtaagtttcctcaaacaggttgtt
tattcattccctacaacaactgtgggtccatttgttcctaccattatgaaagcaattgtt
accatgacggatgattgtaagaaacacttccgtcgagaaacccaacacatgcttgatcgc
atgatacgtagatatggctgtgacgctattgaaagacaagtgcctggtagtgatcaaatt
atgttgaagaggattcgtaatctgaggaaactccatgccaggaaagaacgtttacgtgca
gagaggcttaaaaataaattagcggttgacgatagtgaagatgaggacttcactatcaaa
gcacgggccaaaaccattgaagaaattcttgctgagagtgatgatgagctcgatcttgat
caaaatgaagcctcaaagggagggaaaaagaaatcacaagcttggattaaggaagaacca
ggagatattattgatcttgcagattctatggctgcaagtaaaataagtgcatcaaggcct
aatgtagccactggatcaaatgctgctaagcagtcaaagaaggtcaaagaccgcggtttt
aaaactgctgaagatgggaggcttatcattgatgacaaaggtagtgatgatgaggaaact
gaaggagaacgtaaatttaaatcaagtcgaaggattccaactatctcagattcagaatca
gatgaggacatggatgctgatggtaatgacgatggtgatgctaagagcaccaagagtgga
gtcactgctaaaggacgtaaacgtaaattgagtaatagtgatgctcgcagtaccacaact
gctggtccaaacgataagtataaaactggtgggtctggtattcatagacccgttgggaaa
gccatgagtgtaaaaagtggtgttagtgctaaaacggccaagagtgggaaatctaccact
tccactgcctatggtgctgagtaccgcgccaagaaggccaggggtgatgtgaagaaggga
ggagctccagatccatacgcatatgtaccattaaacagaggattattaaataagaggaaa
agactgaagcaggaaggacaattcaagggtcttgtccgtgcggctcgcaagggggctgct
gctggcagagtggccaaggttcgaaagacccgaaaatag
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