Thrips palmi (melon thrips): 117653920
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Entry
117653920 CDS
T08251
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117653920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117653920
03036 Chromosome and associated proteins [BR:
tpal03036
]
117653920
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117653920
Coactivators
SAGA/TFTC/STAGA complex
117653920
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117653920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
117653920
NCBI-ProteinID:
XP_034255836
UniProt:
A0A6P9AK57
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MASANFLEEALSTDVDDSAVSAIVGSLENNSVTSAVSASSASATFTGGIKNHVNSAVSNG
APVSSEKHSPSPVAGAVNNIILNDASQTNTIQTSNLGQIKVIASVPGEVTSRPTFVNQVT
TSSIGLTQTTLANLSKGQEPVRILVPTSSQTAGGMNINNARLPLTTQHVGALQNGSVALT
SLPSQTVVNPTTTVVSQNQLSTSANVIKQIPQTIGVINALDPTKAGASTVVLKASGNQLA
TTASIASAVMPVPMSVNSSAPMTATSINSVVTGSTVTTSGTSVMTLSKPLTQSVTAIGSQ
GNLLSGNVQILNVNALRQTTPGMVPPKGPLRVVSGTPIRAAGGVQGITLQALQSLPGTQN
LLIKTENGFQLVRVGPGTGTATATALGAGSHGNATQTLRLQSFPGLSSVALTASTSGTTA
TVNSITTQVPVPALSTPTTAATVVTSAVPVAVTQAAPPAQPRPAQVDTTKEKCRKFLANL
LELSSREPKSVERNVRSLIQELVDCKVEPEEFCERLERLLNASPQPCLIGFLKKSLPLLR
QAMVTKELVIEGIRPPPANVMYSTVTSAVTTPVVSCPPLQATQIRPAGLTTQTVRVVTPV
NATNAASIVGGMQGPRHVTVQHRLVTPLQFVSPALAGNKMFSHSVMTSQVPITTSASGIV
TQPVATSVVTSQPSPVASPIPASSIATVPVTMSAQVLCRPGTPGTLQLQPRAIMPIKQVA
AMRPQTRPLSPVIRTPTPIRVTTPLNKATIVSKAPPKLTAAQQRMQAKGMVTIGTAGIAP
DLVNSGSVSTVLTMSTAAAAHSVNSSIAAPIVSSVTSLAGVGASAMGVTPVVSAPMSSGT
PTTVISSLATTATTVFAPGSQISRTISKEKDKKPVGVTPATAAAATAAAAAAAAASSSYT
GDDDINDVAAMGGVNIIEETQRILGSTDFVGTQIRSCKDDIFLHSPTLQQKIRNIAIEQG
LDEPTADVAALISHAAQERLKNFVEKLAVIAEHRMDIIKLDPRYEVSQDVKGQLKFLEEL
DRMERKRNEEKERELLLRAAKSRSKSEDPEQAKLKAKAKEMQRAEMEEVRQREANMTALQ
AIGPRKKPRLDGSLNDGSVTTPGNGATTTSNGTASGRPQLPSRPRVKRVNIRDLVFLLEQ
EKESCRSTFLYKAYLK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaacttcttggaggaagctctgagtacagacgtcgacgactcggctgtc
agtgcaattgtggggtcgttggagaataactcggtcacctcagctgtttctgcgtccagc
gcctcggcgacattcacaggaggcattaaaaatcatgtgaacagtgcagtttccaacgga
gcccctgtttcgtctgagaaacacagtccgagtccggtagcgggagcagtgaacaatatc
attttgaatgatgcaagccaaacaaacacgatacagacctctaatttaggtcaaattaaa
gttatagcgtctgttcctggggaagtgacaagtaggcctacctttgttaatcaggttact
acttcaagcataggcctaacccaaactactctagcaaatttgagcaaagggcaggaacca
gtgcgtattttggtccctacatcaagccagactgcgggtggaatgaacataaacaatgca
agactgcctcttacaactcaacatgttggtgctttgcagaatgggagtgttgccttgacg
tctcttccgtcacagactgtggtgaacccaaccacaactgttgtttcgcagaatcaactc
tccactagtgccaatgtgatcaagcaaattcctcaaactataggcgtaattaatgctttg
gatcctaccaaagctggcgcctcaactgttgttttaaaagcaagtggaaatcaattggca
actacggcatcaatcgcttcggcggttatgcctgttcctatgtcagtaaacagctcagca
ccaatgacggctactagcatcaatagtgtggtgactggatcaacagtgacaacaagtgga
acttcagttatgactctatcaaagccactcacccagtcagtcactgcgattggatcacaa
ggcaatcttctttcgggcaatgtgcaaatacttaatgtaaatgccttacggcaaaccact
cctggaatggtgcctcctaagggcccactgagagtcgttagtggaaccccaatacgagca
gcaggtggtgttcaagggatcactcttcaggcattacaatctcttcccggaactcagaat
ctgttaatcaagactgaaaatgggtttcaattggtccgagtgggaccagggacaggaacc
gcaactgcaaccgccttaggcgcaggaagtcatggcaatgctacgcaaaccttaaggctt
caatctttccccggattaagttcagttgcgctaacagcctctacatctggcacaacagca
accgtaaatagtatcacaacccaagtccctgttccggcattgtccacacccacgacagca
gctacagtagtcacctctgctgttccagttgctgtaactcaagcagcacctccagcccag
cctcgtccagctcaagttgacactacgaaggaaaaatgccgcaagttcttggctaatttg
ttagaactgtcgagtcgtgagcccaagtctgtagaacgcaacgtacgctctctcattcaa
gaattagttgactgcaaggttgagcctgaggaattttgtgaaagactagaaaggctgtta
aatgcatcgccacagccttgtttaatagggtttctcaagaaaagccttcctttattgagg
caggccatggttacaaaggaacttgtcattgaaggcattcgtccaccaccagctaatgtg
atgtacagcactgttacttcagctgttaccactcctgttgtatcttgtcctccgctacag
gcaactcagataagaccagccggtttaacaactcaaactgtgagagtagtcactccagta
aatgctaccaatgctgcttctattgttggaggtatgcaaggaccacgccatgtaactgta
caacatcgtctagttacgcccctccaatttgtgtcacctgcattagctgggaacaaaatg
ttttcacattcggtgatgacatcacaggtgcccatcacaacgtctgcgtctggcatcgtc
actcagccagtagcgacatcagtggtgacatcacaaccttcacctgtggcatcaccaatc
cctgcatcttctatcgccaccgttccagtgacgatgtctgctcaagttttatgtagacct
ggtactccagggactcttcaactacaacctcgtgcaataatgcccataaagcaagtagca
gccatgaggccacaaactcgacctctttctcctgtcatacggacacccaccccaatcaga
gtaactactcctttaaataaggcaacaatagtatcaaaagcacctcccaaacttactgct
gctcaacaacggatgcaagcaaagggtatggttaccataggaactgctggtattgcacca
gatctagtgaacagtggatcagtgtctacagtgttaaccatgtccactgcagcagctgca
cattctgtaaatagttcaattgctgctccaatagtatcatcagttacttccttggctgga
gtaggggcatcagcaatgggtgtgacgcctgtcgttagtgcaccaatgtcatctggcact
ccaacaacagtcatatcaagtcttgctacaactgcaactacagtgtttgcaccaggttcc
caaatttctagaacaatctcaaaagaaaaagataagaaacctgtaggagttactccagcc
actgcagcagcggctacagcagcagcagctgcagccgcagcggcctcttcttcctacact
ggggatgatgacataaatgatgttgcggctatgggaggagtaaatattatagaagaaacg
caaagaattctagggtctacggattttgttggaactcaaattcgctcttgtaaggatgac
atattcttacattcgcctaccttgcaacagaaaataagaaatattgcaattgagcaaggc
ttagatgaacctacagccgatgttgctgcccttatctcacatgcagcacaagaaagatta
aaaaattttgtggaaaaacttgctgttattgctgagcatagaatggacattataaagctt
gacccaagatatgaggtttctcaagatgtaaagggccaattgaagtttttggaggaatta
gacagaatggaacgcaaacggaatgaagaaaaagaacgagagctcttgctgagggcagcc
aaaagcaggtcaaaaagtgaagatccagaacaggcaaagcttaaagccaaggccaaagag
atgcaaagagcagagatggaagaagtaaggcaaagggaggcaaatatgacagctctgcag
gccattgggcccagaaagaaaccacgtcttgatggctctttgaatgacggatctgtaaca
acccctggtaatggggcaaccaccacaagtaatggcacagcttctggtcgacctcagctt
ccttcccgcccaagagtgaagagagttaatataagagatttagtatttttacttgaacaa
gagaaagaatcgtgtagatcaacatttttatacaaagcttatttgaagtaa
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