Thrips palmi (melon thrips): 117654190
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Entry
117654190 CDS
T08251
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117654190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117654190
Enzymes [BR:
tpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117654190
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117654190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
117654190
NCBI-ProteinID:
XP_034256310
UniProt:
A0A6P9AFS1
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MPEVPSLKNLYSGFGKIPEKQNKFLQTLGQPHIDSFNFMLKSGLDLAVNDLVPVEFQLEG
GDVIKLSIEGCKILMPAVPSGTIGVKSTQIYPTECRQSATTYKGRVVGHLKWWINGQEQS
PIKKDFGEIPIMLKSDACHLSKMSPKELISHKEHENEWGGYFIVKGHERLIRMLLQQRRN
YPIAVTRSTWRAKDACFSDMGILLKSVREDESSNNNALHYVTDGTAKLRIALRRNLYYIP
VVLIIKCLADVTDEFIYDQIMAGHEDDLYFKGCVLNMLRQVHDSNVHTHADAVKYFGSNF
RVRLLYDLPAWSTDQAITEHVLRKTVCIHLDDNMDKVNLLVMMIQKLLTFAQGKCRAEGV
DGVMMQEILLGGHVYLQLLKERLQGSLSNLRLNIEKRDLSKAGLKLTAAELQNQFRKVST
LESSISTFLATGNIPLSGLNLPQDKGLTIVVENINRMRYMSHFRAVHRGSFFQEMRTTEA
RQLLPDAWGFICPVHTPDGTPCGLLNHLSRDTEVTRNPDPALVKNIPTILSSLGMLPLHS
PVAQATALTECSVVMLDGRVLGHVHQNAIGRLVDKLRVLKIKGEKVPNTLEIAHVPMKSC
KGTQYPGLFLFTGPARMMRPVINLACKQVELIGTFEQVYLDVCITPAEAYKGRTTHMEIS
KTAFLSNLACLIPMPDLNQSPRNMYQCQMGKQTMGTPCHTFDIQAETKLYRLQTPTSPLF
RPSHYDEVSLDDYGMGTNAIVAVISYTGYDMEDAMIVNKASLERGLAAGSMIKTDFYELP
TSDSYFARDPDNKELPKYLDADGLVYPGTRLTAFTPICCYYDNEKKDFHIVYYKSKEEGW
VQSVRQCGSMSSSQPAKANINYTVQRNPSVGDKFASRAGQKGILSAKWPSEDLPFTESGL
VPDIVFNPHGFPSRMTIAMMVEIMAGKAAAVHGFVQDATPFRFTEDDTAIDYCGRLLEAA
GYNYYGTEKMYSGIDGREMNASIFFGVVHYQRLRHMVSDKWQVRSTGPVDAVTHQPVKGR
RRGGGVRFGEMERDGLLSHGASFLLQDRLFHCSDKAKHKVCRICGTLLGPYFGLSDAAAS
GRVLRCRLCEDKGDVATVEIPHIYKYLVAQMVSMNINLKMELSEEK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggtgccttccttgaaaaatttgtacagtggctttgggaagattccagaaaag
caaaacaagtttttacagaccctcggacaacctcacatagattcgtttaattttatgcta
aagtcaggcttagatcttgctgttaatgatttagtaccagtggagttccaacttgaaggt
ggagatgttatcaagctgagtattgaggggtgtaaaatattgatgcctgctgtcccctct
ggaactattggtgtgaagtctactcaaatctatccaacggaatgtcgtcagagtgctacc
acatacaagggacgtgttgtaggccatctcaagtggtggataaatggccaggaacaaagt
cccatcaagaaagattttggggaaattccaatcatgcttaagtctgatgcttgtcatctt
tccaaaatgtctccaaaagagttgatttcccacaaagagcatgaaaatgagtggggtgga
tattttattgtgaaaggtcatgaaagattgatccgaatgctcctgcagcaaaggagaaac
tatcccattgcagtcacccgctcaacttggcgggcgaaagatgcctgtttttctgatatg
ggtattttgctcaagagtgtcagggaggatgaaagtagtaataacaatgcgttgcattat
gttactgatggaactgcaaagttacgaattgctctcagacgtaatctgtattacatccct
gttgtccttatcataaagtgcctggcagatgtcactgatgaatttatttatgatcaaata
atggcagggcatgaggatgacttatactttaagggttgtgttttgaacatgcttcgtcaa
gttcatgatagcaatgtacacacacatgctgatgctgtcaaatattttgggagcaacttt
cgtgttcgtcttctttatgatcttcctgcttggtccactgaccaagcaattacggagcat
gtgttaaggaaaactgtctgcattcacctagatgacaatatggacaaagttaacttgctt
gttatgatgattcagaaactactcacttttgctcagggcaaatgcagagctgagggagta
gatggcgtaatgatgcaagaaattcttcttggtggtcatgtttatttacagctcttaaaa
gaacgccttcaaggatctctgtcaaacctaaggttaaatattgaaaaaagagacttatct
aaagctggcctaaaacttactgctgctgagcttcaaaatcaattccggaaggtatcaact
ttggaaagtagcatatcaacatttcttgctactggcaacatacctctgagtggtttaaat
ctcccgcaagacaaaggactgacaattgttgtcgaaaatattaacagaatgcgatacatg
tcccattttcgggctgttcaccgaggctccttcttccaagaaatgcgtactacagaagct
cgacagttgctgcctgatgcttggggctttatttgcccagtacacactccagatggaact
ccctgtggtttacttaaccatctttccagagacactgaggtaacaagaaacccagatcct
gctcttgtgaagaatataccaacaattctctccagcttgggaatgctccctctgcactct
ccagtggctcaagcaacagcactaacagaatgttctgttgtaatgcttgatggtagagtt
cttggacatgttcatcaaaatgcaattggtagacttgtagataagctcagagttctaaag
atcaaaggtgaaaaggtgccaaacactctggagatagctcatgtacctatgaaatcatgc
aaaggaactcaatatcccggacttttcttgtttaccggccctgcacgaatgatgcgacct
gtcattaatttggcttgtaaacaggttgaactcattggaacttttgaacaagtttactta
gatgtatgcatcacacctgcggaagcatacaaaggtcgcacaacacacatggaaatttca
aaaacagcctttctcagcaacttagcatgtctgatccctatgcctgacttgaatcagagt
cccagaaacatgtaccagtgtcagatgggtaaacaaaccatgggaactccatgtcacacc
tttgatatacaagccgaaactaaattgtatcgtctccagacccctacttctccactcttt
aggccttcacattatgatgaggtcagcttggatgactatggcatgggaacaaatgcaatt
gttgctgttatttcatacactgggtatgatatggaagatgctatgattgtgaacaaggcc
tctctggagcgagggttggcagcaggttccatgataaagactgatttttatgagcttcct
acttcagattcatattttgcaagagaccctgacaataaagaattacctaaatatcttgat
gctgatggcttggtataccctggtactcgcctaacagcattcacccctatttgctgctat
tatgataatgaaaagaaagactttcatattgtttattataaaagtaaagaagaaggttgg
gtgcagtctgtgagacaatgcggatcaatgtcaagcagtcaaccagcaaaagccaacatc
aattacacagttcagagaaatccatctgtaggtgacaaattcgctagtcgagctggtcag
aagggtatcttaagtgccaagtggccttcagaggatttaccattcacagaaagtggcctg
gtaccagacattgtgttcaaccctcatggttttccctctcgaatgactattgccatgatg
gtggagattatggcaggtaaagcagcagcagtacatgggtttgtccaggatgccacacca
ttccgctttacagaagatgacactgctattgactattgcggtaggcttctggaagctgct
ggctataattactacggaactgagaaaatgtacagtggcattgacggtagggaaatgaat
gcatccatcttttttggagttgttcattatcaaagacttcgtcacatggtctccgacaaa
tggcaggtcagaagtacaggacctgtagatgcagttactcatcaacctgtcaaaggtcgc
agaagaggtggtggcgttcggttcggagagatggaacgtgacggattgctgtctcatgga
gcatcattcttgctacaagacagattgtttcattgttctgacaaggctaagcacaaagtt
tgtcgcatctgtggaacattgctggggccttactttggactgtctgacgctgcagcctct
ggaagagtgctgcgttgccgcttgtgtgaagataagggtgatgtggctactgtagaaatc
ccacacatctacaagtatttggttgctcaaatggtatcaatgaatataaatttaaaaatg
gagttgagtgaagaaaaataa
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