KEGG   Thrips palmi (melon thrips): 117654428
Entry
117654428         CDS       T08251                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
tpal  Thrips palmi (melon thrips)
Pathway
tpal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117654428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpal03041]
    117654428
   04121 Ubiquitin system [BR:tpal04121]
    117654428
Spliceosome [BR:tpal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    117654428
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    117654428
Ubiquitin system [BR:tpal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117654428
SSDB
Motif
Pfam: SART-1 HIND Transformer DUF7740 LcrG
Other DBs
NCBI-GeneID: 117654428
NCBI-ProteinID: XP_034256944
UniProt: A0A6P9AHU0
LinkDB
Position
Unknown
AA seq 813 aa
MGHKHKKEKRKHRSRSRSRSVEKERERERERERERERERAKHRHHKRHHKDKRAEKRPKE
DSPTYISSDDDCIVVPPPPKISRQATPPPPPPPAISNAPPESSSGAGDSLSIEETNRIRA
KLGLKPLQVDDKPTSVEVRADNDYKNSTEKTAAEFGLEVINDDLGEFVHKPADNLAKKVK
ADKLKEKLAERRAKRVMEQKLARIKKLGESSSDEEESATSWIDKSRKIAEEKAQAEKRAK
LLQEMDEEFGVGDLVAEEMKTERRNVYSTKDLRGLRVEHDLGSFGDGKQVILTLKDQGVL
EEEGDVLVNVNMLDDEHHKKNIDRRKQKPGYNAYDDEEMDTYEDPQVKVLSKYDEEIDGV
KKKSFTIGVDDSAAALARKREEALSVKNKLMKKRLETLAMPAPKLAAEYYNEEEISTKFK
KIKKVKKVRKKGILKADDLAAITKQEDPSKDFGSRRIRSRVVDDDDELKAPPPPRISTVD
DENIKEEPMEIDLDDLPPLPADIATIKVEPEEDLQLELALKKARRLMQREAVEEAANVEM
VAQSIVKEELQPAFGETEPGGSIVLNSTAEFCRTLGDIPTYGLAGNRDEDAEELLDFERE
MIEEQRRRQEEDGKRGAWNEVEGDEPPAEIEPMETPILDPEPDLGGGMAGALRLAVSKGY
LEKEVSNRPSASRFAHLQAQNYSIEDKTHAEDDKFGRRERYAGPTSEFKDKDGYKPNVKL
DYIDDEGHVLNAKEAFRYLSHKFHGKGPGKNKVEKRMKKKEQDVLMKQMSSTDTPLGTLN
MLQAKQKETQSAFIVLSGGKHQTATISKTKLSK
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgggccataaacataaaaaagaaaagcgcaagcaccggagtagaagtcgttcaagatct
gtcgagaaagagagggagcgggaaagggaacgggagagggagagggagcgtgaaagagca
aaacaccgccaccacaagagacatcacaaggacaagagagcagaaaaacgccctaaagaa
gatagtccgacttacattagctccgatgatgattgcattgtggttccaccaccaccaaag
atatctcgtcaagccaccccaccccctcctcctcctccagctatttcaaatgcaccaccc
gagtctagctctggtgcaggagactcattgtcaattgaggagacaaacagaatacgtgca
aaactgggtttgaaacctctacaagttgatgacaaacccacctctgtggaagtgcgagct
gacaatgactataaaaactctactgagaagactgcagccgagtttggtttggaagttatc
aatgatgatcttggagagtttgtccacaaacctgcagataacctggccaagaaagtcaag
gctgacaaactcaaagagaagctggcagagcgaagagcaaaacgtgtcatggaacaaaaa
ttggccagaataaagaaactaggtgaatcaagtagcgatgaagaggaaagtgcaacttct
tggattgacaagagccgtaagattgctgaagaaaaagcacaagcagaaaaaagagctaaa
ttgttacaagaaatggatgaagagtttggtgttggagaccttgtcgctgaagaaatgaaa
acagagcggcgaaatgtgtacagtaccaaagacctgagggggctccgtgttgaacatgat
ttggggagctttggtgatggcaagcaagtaattttaaccttgaaggatcagggtgtgttg
gaagaagagggtgatgtgttggttaatgtaaacatgttggatgatgaacatcataagaag
aacattgacaggaggaaacaaaagcctggttacaatgcctatgatgatgaggaaatggat
acatatgaagaccctcaagttaaagttttatcaaaatatgatgaagaaattgatggggtc
aagaagaagagcttcaccattggtgtggatgactctgctgctgcactggcccgtaaaagg
gaagaggctctcagtgtaaaaaataaattgatgaaaaaacgtctagaaactcttgcaatg
ccagcacccaagcttgcagcagagtactacaatgaggaagaaatcagtactaaattcaag
aaaataaaaaaggttaagaaagtccgtaagaaggggatattgaaggctgatgacttagct
gctattacaaagcaggaagatccttccaaagattttgggtcaaggcggataaggtctcgt
gttgttgatgatgacgatgaattgaaggcaccccctcctcctcgaataagtaccgtagat
gatgagaacataaaagaggaacctatggaaatagaccttgatgacttgccccctcttcct
gcggatattgctaccattaaagtggaaccagaagaggatttgcagttggagcttgctctg
aaaaaggcccggagattaatgcagagggaagcagtagaagaagctgcaaatgtggagatg
gtggcgcagtctattgtcaaggaggaattacagcctgcctttggagagacagaacctggt
ggttccattgttctcaattccacagctgagttctgtcgtaccctaggtgatattccaact
tatggtcttgcgggaaacagagatgaagatgctgaggaactccttgattttgagcgagaa
atgattgaggagcaacggcgcagacaggaagaggatggaaaacgaggagcgtggaatgag
gtggaaggcgatgaacctccagcagaaatagaacctatggagacacccatcttggaccca
gagccagatttgggtggaggaatggctggtgccttgaggttagctgttagcaaaggctat
ttggaaaaggaggtttccaataggccttcagcctcccgatttgctcatttgcaggcccaa
aactattcaattgaagacaaaacacatgctgaggatgataagtttgggagacgagaaagg
tatgccggtccaacatctgaattcaaagacaaggatggatacaaaccaaatgtcaagctt
gactatattgatgatgaaggtcatgtgctcaatgccaaagaggcattcaggtacctctca
cacaagtttcatggcaaaggaccaggaaagaataaggttgagaagaggatgaaaaagaag
gagcaagatgttcttatgaagcaaatgagctctacagacactcctcttggaaccctaaac
atgttgcaagccaagcagaaagagactcaatctgcatttattgttctcagtggaggaaag
caccaaacagccaccatctcaaaaacgaaactaagcaaataa

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