Thrips palmi (melon thrips): 117654472
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Entry
117654472 CDS
T08251
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpal03009
]
117654472
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117654472
Ribosome biogenesis [BR:
tpal03009
]
Eukaryotic type
Pre-60S particles
Helicases
117654472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
DUF1604
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117654472
NCBI-ProteinID:
XP_034257022
UniProt:
A0A6P9AF99
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MNSSKKVEDVVGFSLPTDGDEGDFPVPKKTSQKGGGFQCLGLSFEILKGIKKRGYKVPTP
IQRKTIPLVMSGRDVVAMARTGSGKTACFLIPMFEKLKVRATKVGARALILSPTRELALQ
TLKFVREIGRFTSLKSVCVLGGDSMENQFTAMHGNPDIIIATPGRFLHLCVEMDLKLDAV
EYIVFDEADRLFEMGFGEQMNDILGRLPDSRQTLLFSATLPKVLVEFARAGLADPVLLRL
DVESKLPELLKLVFLNCRPEDKDAALLVLLKQAIGNDSQSAIFVATKHHCEYVSMLLSHS
GISNSCVYSTLDASARKINVAKFANRTVRTLIVTDVAARGIDIPFLDNVINYNFPAKAKL
FIHRVGRCARAGRSGTAYSLVSTEELPYLLDLHLFLGRGIQKAKTAMYIKKEKEENGDNE
NDEDADGVFGCVPQPLIEEEQANIDMMLIKDVEMESQKRTCKNAYSRYLQTRTGASVESV
RRLRELDFTKLGAHPIFNKIHCLPLEADKQTLLSAMKQYRPKGTVFELGGSIASSQYQAM
KAKRDFHDTNIGKHKLKREELSLKTDAECLESPQALTSSTQDDIDDTFSTIINPAKRRIY
DAETIRAKKMRNKNKVDEKHYIPYSAPDKYLEEGLSVNFTKDANAASLDLTGDTDEMMRH
KKQQMKWDRKKKKMVQVNPEKKVTMIKTEAGQWIPSTFKSGRYQNWQEKNKVEDKADSSD
EEGEEIQRKTKSIHPNTHWGRHNQKLERKKRDKALQNRDQIVKKRLRKEKHKAYVMAKHG
AKVANIQAKKREFRSKFKR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctctaaaaaagtggaagacgtggtggggttttccttgcccactgacggcgat
gaaggagattttcctgtaccgaagaaaacatcccaaaagggaggaggcttccaatgttta
ggtttaagttttgagatccttaagggaataaagaaacgcggttacaaagttccgacacct
atccaaagaaagacgattcctcttgtaatgagtggaagagatgttgtggccatggcccgc
actggaagtggtaaaacagcatgttttcttattccgatgtttgaaaagctgaaggtacga
gctaccaaagtaggtgcaagagctttgattctttcgcccaccagagagttagctcttcag
actttaaaatttgtacgagagattggtcgcttcacaagcttaaaatcagtttgtgtcctt
ggaggggattctatggaaaaccaattcacagctatgcatggaaatcctgatataattatt
gcaactcctggacggtttcttcacttgtgtgttgaaatggatctaaaacttgatgcagta
gaatatatagtatttgatgaggcagacaggctttttgaaatgggttttggagaacaaatg
aatgatattttggggagactcccggatagccgacaaactttgttgttttctgctactcta
cccaaagtattggttgaatttgctagagctggactggcagacccagttctgttaaggttg
gatgttgagtcaaaactgcctgaacttctgaaattagtatttttgaactgcagacctgaa
gacaaggatgcagcccttctggtattattgaagcaagccattggtaatgattctcagagt
gctatttttgttgctactaagcatcattgtgaatatgttagcatgctcttatctcattct
ggaatatcaaattcctgtgtatattccaccctagatgcttcagccagaaaaataaacgtt
gctaagtttgcaaaccgaacagtccggactttaattgtaactgatgtggcagctcgtggt
attgatattcccttcttggataatgtaataaactacaacttccctgcaaaagccaaactt
tttattcatagagtgggtcggtgcgctcgagcaggccgcagtggaacagcgtactctctt
gtttccactgaagaactaccgtacctacttgatttgcatttatttttgggaagaggcatt
caaaaagcaaagacagctatgtatatcaaaaaagagaaggaagaaaatggagacaatgag
aatgatgaagatgcagatggagtgtttggttgtgttccgcaacccttgattgaagaagaa
caagcaaatattgatatgatgctgatcaaggatgttgagatggagagtcagaaaagaaca
tgtaaaaatgcctactctcgatacctacagacccgtactggtgcttcagtagagagtgtg
cgacgcttgagagagcttgattttactaaactaggtgctcatccaatttttaataaaatc
cattgtttgccactggaagctgataaacaaacattgcttagtgcaatgaagcagtatcgt
cctaaagggactgtctttgagctgggaggtagtattgcttcctcacagtaccaagcaatg
aaagccaaaagagatttccatgacactaacataggaaaacacaaactgaaacgagaagag
ctctcattgaaaactgatgctgaatgtttggaatctcctcaagctttgacaagcagcacc
caggatgacattgatgataccttcagcacaataatcaatccagctaaaagaagaatttat
gatgctgaaactataagagctaagaaaatgaggaataaaaataaagtggatgagaagcac
tacattccatattctgcaccagataaatacttggaggaagggttgtcagtcaatttcacc
aaggatgcaaacgcagcttctcttgaccttactggtgatactgatgaaatgatgagacac
aaaaagcagcaaatgaagtgggatcgcaagaagaagaagatggttcaagttaatccggag
aaaaaggttacaatgatcaaaacagaagcaggtcaatggatcccatccacttttaagagt
ggccgttatcaaaattggcaggaaaagaataaggttgaggacaaggcagatagtagtgat
gaagaaggagaagaaattcaacgtaaaaccaagtctattcatcccaacacgcactggggc
agacataaccagaagttggagagaaagaagagagacaaagcacttcaaaacagggatcaa
attgttaagaagaggctccgcaaagaaaaacacaaggcctatgtcatggcgaagcatggc
gccaaggtggctaacattcaagctaaaaagcgcgagttcagaagtaaatttaagagatga
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