Thermus parvatiensis: AV541_01690
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Entry
AV541_01690 CDS
T04274
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tpar
Thermus parvatiensis
Pathway
tpar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV541_01690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpar03400
]
AV541_01690
Enzymes [BR:
tpar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AV541_01690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AV541_01690
DNA repair and recombination proteins [BR:
tpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AV541_01690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DUF7573
NFACT_N
Zn_ribbon_Nudix
Zn_ribbon_6
Zn_Ribbon_TF
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AMA75054
UniProt:
A0A120HT14
LinkDB
All DBs
Position
complement(302725..303528)
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AA seq
267 aa
AA seq
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MPELPEVETTRRRLRPLVLGQTLRQVVHHDPARYRNTALVEGRRVLEVDRRGKFLLFALE
GGVELVAHLGMTGGFRLEPTPHTRAALVLEDRTLYFHDPRRFGRLLGVRRGDYREIPLLL
RLGPEPLSETFAFPGFFRGLKESARPLKALLLDQRLAAGVGNIYADEALFRARLSPFRPA
RSLTEEEARRLHRALREVLAEAVELGGSTLSDQSYRQPDGLPGGFQTRHAVYGREGLPCP
ACGRPVERRVVAGRGTHFCPTCQGEGP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtggagaccacccgtaggcggctgcgtcccctggtcctgggc
cagacccttaggcaggtggtccaccacgaccccgcccgctaccggaacacggccctcgtg
gaggggaggcgggtcctggaggtggaccgccgggggaagttcctcctcttcgccctcgag
ggcggggtggagctcgtggcccacctggggatgacgggggggtttcggctggagccgacg
ccccacacccgggcggccttggtcctcgaggaccggaccctctacttccacgacccccgg
cgcttcgggcgcctcttgggggtgcggcgcggggactaccgggagatccccctcctcctc
cgcctcggccccgagcccctctcggagaccttcgcctttcccgggttcttccgagggctg
aaggagagcgcgaggcccctcaaggccctcctcctggaccagcgcctcgccgccggggtg
ggcaacatctacgccgacgaggccctcttccgcgcccgcctaagccccttccgccccgcc
cgaagcctcaccgaggaggaggcgcggcgcctccaccgggccctgcgcgaggtgctggcg
gaggccgtggaactcgggggaagcaccctctcggaccaaagctaccgccagcccgacggc
ctccctgggggcttccagacgcgccacgccgtctacggccgggagggcctcccctgcccg
gcctgcgggcgcccggtggagcggcgggtggtggccgggcggggcacccacttctgcccc
acctgccaaggggaaggcccctag
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