Thermus parvatiensis: AV541_02445
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Entry
AV541_02445 CDS
T04274
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpar
Thermus parvatiensis
Pathway
tpar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AV541_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpar03021
]
AV541_02445
03400 DNA repair and recombination proteins [BR:
tpar03400
]
AV541_02445
Enzymes [BR:
tpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AV541_02445
Transcription machinery [BR:
tpar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AV541_02445
DNA repair and recombination proteins [BR:
tpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AV541_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
HHH_8
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AMA75171
UniProt:
A0A109QE78
LinkDB
All DBs
Position
422604..423551
Genome browser
AA seq
315 aa
AA seq
DB search
MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIED
VLHEFSTIPGVKEDVVEIILNLKELVVRFLNPNLQTVTLLLKAEGPKEVKARDFLPVADV
EIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQ
VEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAAAVAVPEEAK
EPEAPPEREEELDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLKNIPGIGERSLE
EIKEALEKKGFTLKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttggattccaagctcaaggccccggtcttcacggtgcgcacccaggggcgggagtac
ggggagttcgtcctggagcccctggagcggggcttcggcgtcaccctgggaaacccccta
aggcgcatcctcctttcctccatccccgggaccgcggtcaccagcgtctacattgaggac
gtcctccacgagttttccaccatccctggggtcaaggaggacgtggtggagatcatcctc
aacctcaaggagctggtggtccggttcctgaaccccaacctccagaccgtaaccctcctc
ctcaaggccgagggccccaaggaggtgaaggcgcgggacttccttcctgtggccgacgtg
gagatcatgaaccccgacctccacatcgccaccctggaggagggggggcggctcaacatg
gaggtccgggtggaccggggggtggggtacgtcccggcggagaagcacggcatcaaggac
cggatcaacgccatcccggtggacgccgtcttctccccggtgcgccgcgtggccttccag
gtggaggacacccgcctggggcagcgcaccgacctggacaagctcaccctcaggatctgg
accgacggctccgtcacccccctcgaggccctgaaccaggcggtggagatcctccgggag
cacctcacctacttctccaacccccaggcggccgccgtggcggtccccgaggaggccaag
gagcccgaggcgccgccagagcgggaggaggagctggacctgcccttggaggagctcggc
ctctccacccgggtgctccacagcctcaaggaggagggcattgagtccgtccgggccctt
ctcgccctcaacctcaaggacctgaagaacatccccgggattggggagcggagcctggag
gagatcaaggaagccctggaaaagaagggcttcaccctgaaggagtga
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