Thermus parvatiensis: AV541_03655
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Entry
AV541_03655 CDS
T04274
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpar
Thermus parvatiensis
Pathway
tpar03420
Nucleotide excision repair
tpar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AV541_03655
03430 Mismatch repair
AV541_03655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpar03400
]
AV541_03655
Enzymes [BR:
tpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AV541_03655
DNA repair and recombination proteins [BR:
tpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV541_03655
MMR (mismatch excision repair)
Other MMR factors
AV541_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
FGF
DUF3553
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMA75339
UniProt:
A0A109QJM0
LinkDB
All DBs
Position
640224..642305
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AA seq
693 aa
AA seq
DB search
MSDALLASLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVT
FTNKAAEEMRERLRGLVPGAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTAL
LKEVLKELALSARPGPIKALLDRAKNRGVGLKALLGELPEYYAGLSRGRLGDVLVRYQEA
LKAQGALDFGDILLYALRLLEEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEE
ANLMAVGDPDQGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRLANAVIVKN
ALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARLGPPWDRYAVLYRTNAQSRLL
EQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGIGPATW
ARVQLLAQEKGLPPWEALKEAARTSSRAEPLRHFVALVEELQDLVFGPAEAFFRHLLEAT
DYPTYLREAYPEDAEDRLENVEELLRAAKEAEDLQDFLDKVALTAKAEEPAEAEGKVALM
TLHNAKGLEFPVVFLVGVEEGLLPHRNSVSTLEGLEEERRLFYVGITRAQERLYLSHAEE
REVYGRREPARPSRFLEEVEEGLYEVYDPYRVPKPAPPPHRPRPGAFRGGERVVHPRFGP
GTVVAAQGDEVTVHFEGFGLKRLSLKYAELRPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgccctcctagcctccctcaacgaggcccaacgccaggcggtccttcacttt
gaggggcctgccctggtggtggccggggcggggagcggaaaaacccgcaccgtggtccac
cgggtggcctacctcgttgcccgccggggggtctttccctcggagatcctggccgtcacc
ttcaccaacaaggccgcggaggagatgcgggagcgcctccgggggctggtcccgggggcg
ggggaggtctgggtctccaccttccacgccgccgcgctaaggatcctccgcgtctacggg
gagcgggtgggcttaagacccggtttcgtggtctacgacgaggacgaccagaccgccctc
ctcaaggaggtcctgaaggagctcgccctctcggcccggcccggccccatcaaggccctt
ttggaccgggcgaagaaccggggcgtgggccttaaggccctcctcggcgagcttcccgag
tactacgccgggctttcccggggaaggcttggggacgtcctggtgcgctaccaggaggcc
cttaaggcccagggggccttggacttcggggacatcctcctctacgccctgaggctttta
gaggaggacgaggaggtcctcaggcttgtgcgcaagcgggcccgcttcatccacgtggac
gagtaccaggacacgagccccgtccagtaccgcttcacccggcttctcgctggagaggag
gccaacctcatggccgtgggcgaccccgaccaggggatctactccttccgggcggcggac
atcaagaacatcctggacttcacccgggactaccccgaggcccgggtctaccgcctggag
gagaactaccgctccaccgaggccattctccgcctcgccaacgccgtgatcgtgaagaac
gccctccgcctggaaaaggccctgcgcccggtgaagcggggcggggagcccgtgcgcctt
taccgggcggaggacgcccgggaggaggcccgcttcgtggccgaggagatcgcccggctc
ggccccccttgggaccggtacgccgttctttaccgcaccaacgcccaaagccgccttctg
gagcaggccttggcggggcgggggatcccggcgcgggtggtggggggtgtgggcttcttt
gaaagggccgaggtcaaggacctcctggcctacgcccgcctcgccctcaaccccctggac
gccgtgagcctgaagcgggtcctgaacaccccccctcggggcatcggcccggccacctgg
gccagggtgcagctcctcgcccaggagaaggggcttcctccctgggaggccctgaaggag
gcggcgaggacctcttcccgcgccgagccccttaggcatttcgtcgccttggtggaggag
ctccaggacctggtcttcggccccgccgaggccttcttccgccacctcctcgaggccacc
gactaccccacctacctccgggaggcctaccccgaggacgccgaggaccgcctggaaaac
gtggaggagctcctaagggcggccaaggaggcggaggacctgcaggacttcctggacaag
gtggccctcaccgccaaggcggaggagcccgccgaggcggaaggaaaggtcgccctcatg
accctgcacaacgccaaggggctggagttccccgtggtcttcctcgtgggggtggaggag
gggcttctgccccaccgcaactccgtaagcacccttgagggcctggaggaggagcgccgc
ctcttctacgtgggcatcacccgggcccaggaaaggctctacctctcccacgccgaggag
cgggaggtctacggcaggcgggagcccgcccggccgagccgctttctggaggaggtggag
gaggggctatatgaggtgtacgacccctaccgcgtccccaaacccgcccctccgccccac
cgcccaaggcccggggccttccggggcggggagcgggtggtccacccccggttcggcccc
ggcaccgtggtggcggcccagggggacgaggtcacggtccactttgaagggttcgggctc
aagcgcctttcccttaagtacgcggagcttaggccggcatga
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