Treponema pallidum subsp. pallidum Sea 81-4: TPSea814_000436
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Entry
TPSea814_000436 CDS
T03185
Name
(GenBank) DHH superfamily protein, subfamily 1
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
tpas
Treponema pallidum subsp. pallidum Sea 81-4
Pathway
tpas01100
Metabolic pathways
tpas01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
tpas00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
TPSea814_000436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpas03400
]
TPSea814_000436
Enzymes [BR:
tpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
TPSea814_000436
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
TPSea814_000436
DNA repair and recombination proteins [BR:
tpas03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
TPSea814_000436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
MMS22L_C
STAS_2
Motif
Other DBs
NCBI-ProteinID:
AHN67115
LinkDB
All DBs
Position
complement(463867..464949)
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AA seq
360 aa
AA seq
DB search
MFSSSPPSSLPKSVSSPSPCAARTGDRGRGLSGLIEFIDAHRAFAVVGHEKPDGDCVGSS
LALASFLRRIGKEVELLSAGPFKRREIAAYATLFRPSLSAQIRPSDQTAVIVVDCSELSR
VGAELASQLAPFARAFIDHHETCGDHCAHSFVVKTAPSTTTLVQTLIETMAGSLEAAEAR
ALFLGLATDTGFFRHLDEHSADTFASAARLVRAGANPKDTFLAMNGGRSLASRMLIARVL
SRLTPYYGGALMTSYETCEDAVQLGLDVRDSDALYQLIQSIQGVEAIVVVRQESPTHCSV
GFRSRGSIDVSVIAARFGGGGHRCAAGLRIEGTVDELLPRFVAAFEAQMRAPAAGAQVRS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttccagtcccccgagttctcttcctaagtccgtttcctccccctctccgtgc
gcggcgcgtacaggggatcgggggaggggtctttccgggctcatcgagttcattgacgcg
catcgcgcgtttgcggtcgtggggcatgagaagccggatggggactgtgtaggttccagt
cttgcgcttgcctcgttcctaagacgcatagggaaagaggttgagcttttgtctgcgggt
cctttcaagcgtagagagatcgctgcgtacgcgacactcttccgtccaagtctctctgcg
cagatacggccgtctgatcagacggccgtcatcgtggtcgactgctctgagctcagccgc
gttggcgctgagctcgcctcgcagcttgccccctttgcgcgcgcgttcatagaccatcac
gaaacgtgcggcgaccactgcgcgcactcgttcgtcgtaaaaacagctccgtccaccact
acattggtgcaaacgttaatcgagacgatggccggatctcttgaagcagccgaggcgcgc
gcactttttttgggattggctacggacacaggtttttttcgccacctcgacgagcacagt
gcggacacgttcgcttctgctgcgcgtcttgtacgtgcaggcgccaatccgaaggacacg
tttcttgccatgaacggtgggagatcccttgcttcgcgcatgttgattgcgcgcgtgctt
tctcgactgacgccgtattatggtggcgcgctcatgacctcgtacgaaacttgcgaagac
gcggtccagttggggcttgatgtgcgagactccgatgctctgtatcagctcatccagagc
atccagggcgtcgaggcaattgtggtggtacgtcaggaatctcccacacattgttcggtg
gggtttcgatcgcgaggatcgattgacgtaagcgttatcgccgctcgcttcgggggtgga
ggtcatcgctgcgctgctggccttcgtatcgagggcaccgttgatgaactgttaccccgc
tttgttgctgcctttgaggctcagatgcgtgcacccgcggccggggcgcaggtgcgctcc
taa
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