KEGG   Treponema pallidum subsp. pallidum Sea 81-4: TPSea814_000643
Entry
TPSea814_000643   CDS       T03185                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tpas  Treponema pallidum subsp. pallidum Sea 81-4
Pathway
tpas03030  DNA replication
tpas03430  Mismatch repair
tpas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tpas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TPSea814_000643
   03430 Mismatch repair
    TPSea814_000643
   03440 Homologous recombination
    TPSea814_000643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpas03032]
    TPSea814_000643
   03400 DNA repair and recombination proteins [BR:tpas03400]
    TPSea814_000643
Enzymes [BR:tpas01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TPSea814_000643
DNA replication proteins [BR:tpas03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TPSea814_000643
DNA repair and recombination proteins [BR:tpas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TPSea814_000643
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DEDDh_C DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AHN67310
LinkDB
Position
705972..706619
AA seq 215 aa
MIYDWVFAVHEHVAFTAFDTETTGLKAEEDRIIEIGAVTFDRKGIIARFSTLIFPDRAIP
PDVSKINHITDDMLVNKPRFCEIVSDFSRFIKGTVLVAHNANFDVEFLNAELSLCKKQPL
SHKVVDTYAMAQAVFPGLGRHQYRLQNLALQFGLTVHAAHRAEDDARVCMELFTTMIAHH
AKQNGHCVNHAQSPTIKKLIQEIQASSTDCSQELF
NT seq 648 nt   +upstreamnt  +downstreamnt
atgatatatgattgggtttttgcggtgcatgaacacgttgcattcaccgccttcgacacc
gaaacaactggtttaaaagcagaagaagatcgcattatagaaattggtgcagtaacgttt
gatcgaaagggtattattgcgcgctttagcacgctcatcttccctgatcgggctataccc
cctgacgtgagcaaaatcaaccatattaccgacgatatgctcgtcaataagccgcgcttt
tgtgagatagtttcagacttttctcgattcatcaaagggacagtactcgtcgcacataac
gcaaacttcgatgtcgagtttctcaatgcagaactcagcctgtgcaaaaagcaacccctg
tctcacaaagtagttgatacgtacgcgatggcccaagcggtgttccccgggttaggacgc
catcagtaccgtctgcagaatcttgcacttcagtttggacttacggtacacgcagcacac
agagcagaggatgacgctcgagtatgcatggagctttttacaactatgatcgcacaccac
gccaaacaaaacggacactgtgtaaatcatgcacaaagccccaccataaaaaaattaata
caggagatacaggcatcgagcactgactgttcccaggagctgttttag

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