KEGG   Treponema pallidum subsp. pallidum Sea 81-4: TPSea814_000889
Entry
TPSea814_000889   CDS       T03185                                 
Name
(GenBank) tRNA pseudouridine 55 synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
tpas  Treponema pallidum subsp. pallidum Sea 81-4
Brite
KEGG Orthology (KO) [BR:tpas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpas03016]
    TPSea814_000889
Enzymes [BR:tpas01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     TPSea814_000889
Transfer RNA biogenesis [BR:tpas03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TPSea814_000889
 Prokaryotic type
    TPSea814_000889
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: AHN67538
LinkDB
Position
complement(967486..968571)
AA seq 361 aa
MPDAIVPFAKVSGLTSFAALAQVRRLLGVKKVGHTGTLDRFADGLLLLLVGGFTKLAPVM
TRLEKSYEARIQFGVQTDTLDPEGAVVRCSLFPTFARVRAALPHFTGSIDQVPPEYSALK
FGGVRASDRVRRGEAVCMKARRVFVFDLQVLGCEADLGEFKKTQAGRGAAIADLDLTRVR
AVTLYVRCSAGFYVRALARDIAAACGSCAYVSHLRRTRIGPFDLAQAAGVSRLGSWTWGK
ERASCGAACFDVGAPPPPSSGGVATDSVSFGCEDLTVREIKQAVVSCDVDFANRIGLTAC
SVHAQYASRFLHGERIRACWFQSFGTRRPGERALVFSEGRCLGLIRKAANGFSYDAVFCT
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcctgacgctattgttcctttcgcaaaggtttccggtcttacgagttttgcggcactg
gcacaggtcaggcgtcttctgggagtaaaaaaggtagggcatacggggacgcttgatcgc
tttgctgatgggctgctgttgcttttggtagggggctttaccaaactcgcgccggtgatg
actcgcttggaaaagagttacgaggctcgtatccagtttggggtacaaacagacactcta
gatccggagggggctgtcgtgcggtgctccttgttcccaacatttgcgcgcgtgcgtgcg
gcgctgcctcacttcactgggagtattgatcaggtgccgcctgaatattcggcgctaaaa
ttcggaggtgtgcgtgcgtccgaccgggtgcggcgtggggaagcagtgtgcatgaaggct
cggcgtgtgttcgtctttgacttgcaggtactaggttgcgaggcggatctgggtgaattc
aaaaagacgcaggcggggaggggggctgcgattgctgatcttgatctgacgcgcgtgcgt
gctgtaacgctgtacgtacgttgttcggcaggcttctacgtgcgtgcacttgcgcgcgac
atagcagccgcttgcggctcttgcgcgtatgtttcacatttacggagaacacgcattgga
ccctttgatcttgcacaggcggcgggtgtgtctcgtctcgggtcctggacatggggcaaa
gagcgtgcgtcttgcggtgccgcttgctttgatgtgggtgctccaccgcctccgtcctca
ggcggcgtggcgaccgattcagtctctttcgggtgtgaagacttgacggtgcgtgagatt
aagcaggcagtggttagctgtgatgtggactttgcgaatcgtattggacttacggcgtgt
tcagtgcatgcgcagtatgcgtcgcggtttttgcatggggaaagaatacgcgcatgttgg
ttccagtcgtttggtacgcgaaggcccggggaacgtgcgttggtgttttccgagggtcgc
tgtcttggattaataaggaaagcggcgaatgggttttcgtatgatgcggtattttgtacg
gagtga

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