Treponema pallidum subsp. pallidum Sea 81-4: TPSea814_001021
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Entry
TPSea814_001021 CDS
T03185
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
tpas
Treponema pallidum subsp. pallidum Sea 81-4
Pathway
tpas00970
Aminoacyl-tRNA biosynthesis
tpas01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpas00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPSea814_001021 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tpas03029
]
TPSea814_001021 (gatB)
Enzymes [BR:
tpas01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
TPSea814_001021 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
TPSea814_001021 (gatB)
Mitochondrial biogenesis [BR:
tpas03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TPSea814_001021 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AHN67664
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All DBs
Position
1114609..1116138
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AA seq
509 aa
AA seq
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MSDLQTGTVPSIAGATDDTHAAPFFYEVIIGCEIHCQLLTKTKAFCACANRSGGMPNSRV
CPVCLGLPGALPVVSEEYVRLGVRAGLALGCTIQLWSAFDRKHYFYPDLPKGYQITQYDA
PLCTDGAVDVQGVDMPVQRRVRIERIHLEEDAGKSLHAADAYSYIDFNRCGVPLIEIVSR
PDLRSAEEAACFMQTIREILTFIEVTDGNLEEGALRCDANVNVRILYKGQEHHTPISEIK
NMNSYRMVRDACTYEVQRQLQEFWQKGPASKEEMQRKRTMGWDPVEGVTLLQRTKHSLRD
YRFMRDPDLPDLHLTPAYVQHLSYTVGELPAARRARFKLDLGLSAFAAQTLTGSRMLADW
FEKAAHASKNARRVANWILSEVLAVVNEKNICIAELNLSPEAIAELMDAVEDQRITGKQA
KDIFAQMLATGARAQDIISAQGLAQLSDEEEIATLVQTVFQEHPKALRDWQHGKTNVAAW
LMGQVMKRSRGRAHPARVATLVHQALSQL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctccaaacaggcacagttccctccattgcaggcgccacagatgacacacat
gccgcaccctttttctacgaggtaattattggctgtgaaattcattgtcagcttctaaca
aagaccaaagctttctgtgcctgtgcaaatcgctcaggaggaatgccgaatagccgtgtg
tgtcctgtgtgtcttgggttgccaggagcgttgcccgttgtgagtgaagagtacgtgcgg
ctcggggtgcgcgccggacttgcgttggggtgcactatccagctttggtccgcttttgat
cgcaagcactatttttatccagatctcccaaagggttatcaaattacccagtacgacgct
cccttgtgtacggatggtgcagtggatgtacagggagttgacatgcccgtgcagcggcgt
gtccgtattgaacggatacatttggaggaggacgcaggcaaaagcctgcatgctgcagac
gcttacagctatattgatttcaatcgttgtggggtgccgctcattgaaattgtatctagg
ccggatctgcgctctgcagaggaggccgcatgttttatgcagacgatccgcgagattctc
acctttatcgaggtaacggatggtaatttagaagaaggcgcactgcgatgcgacgcgaat
gttaatgtgaggattctgtacaaagggcaagaacaccacactcccatttctgaaatcaaa
aatatgaactcgtatcgtatggtgcgggacgcgtgtacgtatgaggtacagcgtcaattg
caggagttttggcaaaagggtcctgcgagcaaagaagagatgcagagaaaacgcacgatg
ggctgggatccggtcgaaggggttacgcttttacagcgtacaaagcactcactgcgcgat
tatcgtttcatgcgcgatccagacttacctgacctgcacttgacccctgcatatgtccag
catctctcttacacagtcggggaacttccggcagcgcggcgtgcacgtttcaaacttgac
cttggcttgtcggcgtttgcagcccaaacgcttaccggcagccgcatgctcgcagactgg
tttgagaaggcagcgcatgcgtctaagaatgcgcgacgagtggcaaactggattctgtcg
gaggttcttgcggtagtaaacgagaagaatatctgcattgcagagctcaatctgagtcct
gaagcaattgccgaactaatggatgcagttgaagatcagcgcattaccggaaaacaagca
aaggatatatttgcacaaatgcttgccaccggtgcgcgagcgcaggacattatctccgca
cagggtctggcacaactttcagatgaggaagaaatcgcaacgttagtgcagacggtgttt
caagaacatccaaaggcactgcgtgattggcaacacggtaagacaaacgtggctgcctgg
ctcatggggcaagtaatgaagcgttcccgcgggcgcgcacaccctgcgcgagtggcgacg
ctcgtccaccaagcactctctcagctgtaa
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