Treponema parvum: HRQ91_02725
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Entry
HRQ91_02725 CDS
T07199
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tpav
Treponema parvum
Pathway
tpav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRQ91_02725 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpav03019
]
HRQ91_02725 (rny)
Messenger RNA biogenesis [BR:
tpav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HRQ91_02725 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
Bac_DNA_binding
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
QTQ13457
UniProt:
A0A975F0H2
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All DBs
Position
complement(582218..583747)
Genome browser
AA seq
509 aa
AA seq
DB search
MNIVLFIILPAIGIVLGWTIRWLYARFQLSASEQKAERVKQDAIREAEAQKKEILLEAKD
ELIRERNQQERENRERRAEIQRYESRINKKEELLDQRASEYEKRDKEFANRVTDMEKREA
VMVKQEEQYRQELERISGLTVEEAKSLIIKNLENDAKHDAQALINKIEQESNLSAEKKAR
DILVATIQRIATEITSDITVTTVSLPSDEMKGRIIGREGRNIRTLETITGVDIIIDDTPE
AVVISCFDPVRKEIAKVSLERLISDGRIHPTRIEEIVQKVTREIQQKIYEEGEKALFELG
IHNMNTDGVIALGRLYFRTSYGQNVLNHSKEVALIAAMLAAEIGANRDVAKRAALLHDIG
KGVENETEQNHAEAGAEIARKMGEDPVIINAIAAHHNDVEPSSLEAVIVQIADAISAARP
GARRETVDNYVKRLENLEAVAENFPGVEKAYAIQAGRELRILVNNEKVSDQDVKDLARNI
AKQIESDLKYPGRIKLTMIRETRIVEYAR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagttttattcatcattctccctgctattggaattgttcttggatggactatt
cgctggctgtatgccagatttcaactatctgcgtctgaacaaaaggcagaacgtgtaaaa
caggatgcaattagagaagctgaagctcagaaaaaagaaattttgctagaagcaaaagat
gaactcattcgggaacgtaatcaacaagaaagggagaatagagaacgccgcgcagaaata
cagcgttacgagtcgcgcataaataagaaagaagaacttcttgaccagcgcgcttcagaa
tatgaaaagcgcgataaagaatttgcaaaccgcgttacggacatggaaaaacgcgaagcc
gtaatggtcaagcaggaagaacaatacaggcaggaacttgagcgtatttcaggtcttacg
gtagaagaagcaaagagccttatcataaaaaaccttgaaaacgatgcgaaacacgacgcg
caagcgctcataaacaagatcgaacaggaatcaaatctaagcgcggaaaaaaaggcgcgc
gatatacttgtggctacaattcagcgcattgcaaccgaaattacaagcgacattaccgtt
acaacagtttcattgccgagcgatgaaatgaagggtcgcattatcgggcgcgaaggccgc
aatatccgcacgctcgaaaccataacaggcgtagacataatcattgacgatacgcctgaa
gccgtcgtcatatcgtgttttgatcccgtgcgcaaagaaatagcaaaagtttctttggaa
agacttatttcagacgggcgcatacatcccacacggatcgaagaaatagtacaaaaggtt
acgagggaaatacagcagaaaatttacgaagaaggcgaaaaagctctgtttgagcttggc
atacacaatatgaataccgacggagttatagctttaggcaggctctactttaggacgagt
tacggacaaaacgttcttaaccactcaaaagaagtcgcactcatagcagccatgctcgcc
gccgaaatcggagcgaaccgcgacgttgcaaaacgcgccgcccttctgcacgacatagga
aaaggcgtagagaacgaaaccgaacaaaaccacgcggaagccggcgccgaaatagcgcga
aagatgggagaagacccggtgataataaacgctattgcagcgcatcacaacgatgttgag
ccttcttcccttgaagcggtaatagtgcaaattgcagatgcgatttccgccgcacgcccg
ggagcccgccgagagaccgtagacaactacgtaaaaagacttgaaaatctggaggccgtc
gctgaaaatttccccggtgtggaaaaggcctacgctatccaagcgggacgagagttgcgc
attcttgtaaacaatgaaaaagtttccgatcaggatgtaaaagaccttgcaagaaatata
gcaaaacaaatcgaatcggacttaaaatacccgggcaggataaagcttacgatgatccgc
gaaacgcggatcgtagaatacgcccgataa
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