Treponema parvum: HRQ91_04035
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Entry
HRQ91_04035 CDS
T07199
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tpav
Treponema parvum
Pathway
tpav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRQ91_04035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpav03019
]
HRQ91_04035
Enzymes [BR:
tpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HRQ91_04035
Messenger RNA biogenesis [BR:
tpav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HRQ91_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4391
CMS1
Motif
Other DBs
NCBI-ProteinID:
QTQ13693
UniProt:
A0A975IEA8
LinkDB
All DBs
Position
897373..899004
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AA seq
543 aa
AA seq
DB search
MDFLEFSLHDDLQKGIKEAGYVSCTPVQERVLKSATGAADLYVQSQTGTGKTAAYLIAIA
QELLVRPEIKGKKALVLVPTRELAVQVEDEAKKLLKYTSLRPFSFYGGVGYEAQVAALKK
NVEILIGTPGRVIDLVESKRMALSDVGFLVVDEADRMFDMGFYPDLRTLIKHLPSAENRQ
TMLFSATLNSYVKNLAWEYTLDAEEIQIESENIVVSEIAQELLHVSSDEKVKLLLGILQK
EKPSSAIIFCNTKRGCEVLGKKLKINGIRSDFLIGDMIQSKRLKVLEDFKASRIPVLVAT
DVAARGIDVSDLAMVVNYDLPNEAENYVHRIGRTARAGKSGKAYTFCSEQDVYNLPAIER
FIEMKIPSRVADESLFAEDKSEGVYIRTERRGGGDFDRSASRTRRPRSEESSRRGRPFSK
KTESGSRFKKDKNKFSGEERRQDSGREGSKKYGQRERLKGFQTSKDLEKLENLSFDERMK
LYRQKYAPGTSSMPKAAPQKGAVRSDGRRKNTRKVSSPKKPGFLSKIMSALGFDQKNKQG
KTK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggattttttggaattttctttgcatgacgatctgcaaaaaggaataaaggaagccgga
tacgtttcctgcacccctgtacaagagcgggttttaaaaagtgcaaccggcgcagcggat
ctgtacgttcagtctcaaaccggaacgggaaaaacagccgcttatttaatagcgatagcg
caagaacttcttgtgcgtcctgaaataaaaggaaagaaggctttagtactcgttcccact
cgagaacttgccgttcaagttgaagacgaagcgaaaaaacttttaaaatacacatcttta
agaccgttcagcttttacggcggagtaggttacgaagcccaagtggccgctctcaaaaaa
aacgttgaaattttaatcggcacgccggggcgcgtcattgaccttgtggaaagcaaacgc
atggctcttagcgacgtaggttttttggttgtggacgaagccgacaggatgttcgacatg
ggattttatcccgacttgcggactcttataaagcatcttccttccgccgaaaacagacag
acaatgcttttcagcgccacgctcaattcctatgtaaaaaatcttgcatgggaatatacg
cttgatgccgaagaaattcagatagaatctgaaaatattgtcgtaagcgaaatcgcacag
gaacttttgcatgtttcaagcgatgaaaaggtaaagcttttgcttggaattttgcaaaag
gaaaaaccttccagcgccataattttctgcaacacaaagcgcggatgcgaagttttgggt
aagaagctgaagattaacggtatccgaagcgattttttgatcggcgatatgattcagtcc
aagcggcttaaagttcttgaagactttaaagcttcgagaattcccgttttggtagcgact
gacgtcgccgccagaggtatcgacgtaagcgacctggcaatggttgtaaactatgacctg
cctaacgaagctgaaaactatgttcatcgcataggacgcaccgcccgtgccggaaaatct
ggcaaggcttacactttttgcagcgagcaggacgtctataaccttccggcgatcgagcgc
tttattgaaatgaaaattccgtcaagggttgcggacgaatctttatttgccgaggataag
agcgagggtgtttacatacggactgaaaggcggggaggcggagatttcgacagaagcgct
tcccgcacccgaaggccgcgttccgaagaatcatcgcgcagaggccgtcctttctcaaag
aaaactgaaagcggttcaaggtttaaaaaagacaaaaataaattctcaggagaagaaaga
cggcaggacagcggcagagaaggctctaaaaaatacggacaaagggaaagacttaaggga
tttcaaacttccaaggaccttgaaaaattggaaaatctttcttttgacgagcgtatgaag
ctttacagacaaaagtatgcgcccggaacttcttccatgcctaaggcggctccgcaaaag
ggtgccgtacgttctgacggtcgtagaaagaatactcggaaagttagttcacctaaaaag
cccggatttttgtcgaaaataatgagcgctttaggttttgaccaaaaaaataaacagggg
aaaacaaagtga
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