Treponema parvum: HRQ91_07260
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Entry
HRQ91_07260 CDS
T07199
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tpav
Treponema parvum
Brite
KEGG Orthology (KO) [BR:
tpav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpav03016
]
HRQ91_07260
Enzymes [BR:
tpav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HRQ91_07260
Transfer RNA biogenesis [BR:
tpav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HRQ91_07260
BRITE hierarchy
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
DUF1411
Motif
Other DBs
NCBI-ProteinID:
QTQ14263
UniProt:
A0A975IEV4
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Position
1640691..1642622
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AA seq
643 aa
AA seq
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MIQKKSLVLYKKQPAVVTEVDGDKYTIEFRAVSAAGVSAAASSAASAKTPQFSVQKVREK
DIIFLIDGVSSIQSVLSFEDKNILKQIKEVYELIISDEEEASKAVSFSELKELVSSAFPA
DGAWFLYDALLNSFEFKLDEEEMKHGKLQFFPQTEDSIKSMQKKMEEKEKSAAVREEFLS
RLKQKKLILPDDAKFMVDVEALALGKSDKSKTLQDAEIKQTQENAHKILLDTGIWEITRN
PYPVRWGLSMQSATESLPSPQKEERIAVEGFAYAIDSEYSNDPDDAVGWDGTYLWVHIAD
PASTVIPDSSIDKTARARGATLYIPEGASRMLCESVLSDYALGLNNVSYALSFRIKFDEN
GAVEDCAVLKTEVKVKRLSYAKADEMKDSEELHPLFEIAKKNEERRKKAGAVSITLPEIH
ISVDRDTKKVEITEDERYESEDVVREAMLLAGEGAAKFAFKNNIPFPYVSQDKPEIPKDL
PEGLAGQFKLRRCMRKRNVGVTPSPHAGLGISMYSQVTSPLRRYGDLVAHEQLHAFLDKK
ELLTKDIMLERISAGDAAAAACKNAERNSNLHWTLVYLLQNPDWKGEAVCVEQKGNQGVF
IIPSLAQETLLTPLSPVALNKSVTVQAAKIDIVNLTVTYRQVK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaagaaatctttggttttatataaaaaacaaccggccgtagtaaccgaagtc
gacggcgacaaatatactatagaatttcgcgccgtttccgcggccggagtttccgcagct
gcatcttccgcagccagcgcaaaaacaccgcaattttcagttcaaaaagtacgggaaaaa
gacataatttttttgattgacggggtttcttccattcagagcgttttatcttttgaagac
aaaaatatattaaagcagataaaagaagtctatgagcttataatttcggacgaagaggaa
gcgtcaaaggctgtttctttttcagagttaaaagaactcgtaagttccgcctttcccgcc
gacggcgcatggtttttatacgacgcccttttaaactcttttgagtttaaacttgacgaa
gaagaaatgaaacacggcaaacttcaattttttcctcaaaccgaagattctataaaatcc
atgcaaaagaaaatggaagaaaaagaaaaatccgccgctgtgcgcgaagaatttttgagc
cgcctcaaacaaaaaaaacttatattgccggacgacgcaaaattcatggtagacgtggaa
gcgcttgcgttgggcaaaagcgacaagtcaaaaactctgcaggatgcggaaataaaacag
acacaggaaaatgcgcataaaattcttttggataccggcatttgggaaataacgaggaac
ccctaccctgtccgctggggactttcgatgcagtcggctacggaatcgcttccctctccc
caaaaagaagagcggattgccgtcgaaggctttgcctacgcaatagacagcgaatattcg
aacgatcctgacgacgcggtcggctgggacggaacatacctttgggtgcacatagccgat
cccgcttccacagtcattcccgacagctctatagacaaaaccgcacgcgcgcgaggagcg
accctttacattcccgaaggagcaagccgcatgctttgcgaatccgttctttccgattat
gcgctgggattaaacaatgtgagttacgccttgtcgttccgcataaaattcgacgaaaac
ggagccgtcgaagactgcgcggtattaaagactgaagtaaaagtaaaacgcctctcatac
gcaaaggcggacgagatgaaagacagcgaagaattacatcctctctttgaaatcgcaaaa
aagaacgaagaacgccgtaaaaaagcgggagccgtttcgataacgctgcctgaaattcac
ataagcgtagacagagatacgaaaaaagtagaaatcacagaggacgagcgctacgaatcc
gaagacgtggtgcgggaagccatgctcttagcgggagaaggagctgcaaaatttgcattt
aaaaacaatattcctttcccctatgtgagccaagacaaaccggaaatccccaaagatctt
cctgaaggccttgccggacaattcaaactgagacgatgtatgcgtaagcgtaacgtaggg
gttaccccttcgccgcacgcgggactgggaataagcatgtactcgcaagttacaagcccg
ctccgtcgttacggcgaccttgtggcgcacgaacaattacacgcattcttggacaaaaag
gaacttttaacaaaggacattatgcttgaacgcataagcgcaggcgatgcagctgccgct
gcctgtaaaaacgcggagcgcaacagcaatctgcactggacgctggtatatcttttacaa
aatcccgattggaagggcgaagccgtatgcgtagaacagaaaggaaaccaaggcgtgttt
ataattccgtccctcgcgcaggaaacgcttttaacgcctctgtcgcccgtagcgctaaac
aaatccgtaacggttcaagcggcaaagatcgacatagtaaatcttacggtaacgtacaga
caagttaaataa
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