Treponema parvum: HRQ91_09305
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Entry
HRQ91_09305 CDS
T07199
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tpav
Treponema parvum
Pathway
tpav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRQ91_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpav03019
]
HRQ91_09305
03009 Ribosome biogenesis [BR:
tpav03009
]
HRQ91_09305
Enzymes [BR:
tpav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HRQ91_09305
Messenger RNA biogenesis [BR:
tpav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HRQ91_09305
Ribosome biogenesis [BR:
tpav03009
]
Prokaryotic type
rRNA helicases
HRQ91_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
CMS1
P-loop_SecA
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QTQ15183
UniProt:
A0A975F6I7
LinkDB
All DBs
Position
complement(2107581..2109542)
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AA seq
653 aa
AA seq
DB search
METEEISFEDLGLDEKTLVAVTKKGFETPSPIQILAIPRLLNGDANIIAKARTGTGKTAA
FALPLIQELREQSDHVRALILEPTRELAVQTCTEIKSFVFDKYPRSAVVYGGASMGMQIK
DLKRGAEIVVGTPGRIQDHLERGSLNIEKIDYFILDEGDEMLDMGFIEDIEAIFAKANPS
SRILLFSATMPEPILKIAHKFMGEYEIIEEEGITEEPLLIDQKYWVVRENEKIEALVRLI
DISPDFYGLVFTQTKVDADAVSRMLDERGYEASALHGDIPQLQREKILMRFRSKKTRVLV
ATDVAARGIDITGLSHVVNYSLPFDGATYVHRIGRTGRAGSSGCAVTFVRPDERRKLKFM
QAAVRRASKGEMIEEEIPSVDAVIEAKRKRLFDEIKVSLGVSEPAEADSVRNGISERCGE
DDLLGSVSDPSGAGGFNGGVSEATVLGDINDPENHVKASFIFENLAEQLCSGIYSNPKEI
LARVLENFYGKTLDRSRYGLISSVKSYGEGGQIRLFVQLGRRDGYNARSIADYFSNLLHI
PGRMVDNIDISSSFSLVSLPVSAGKKVLEMSRKDKGLPHMHVDSKSGGGFVLNSRTGREG
RVGRGKYGRAFPNDVRSPSGRAKRRAGKGLNKVEGRKGGAELYKKKKSGEERF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaagaaatctcttttgaagacttgggtcttgacgaaaagacccttgtcgct
gttactaaaaaaggctttgaaacgccttctccaattcaaattttggcgattccccgtctt
ttaaacggcgacgccaatatcattgcaaaggcgcgcacaggcaccggtaagacggcggct
ttcgcccttcctcttattcaggagctaagagagcaaagcgaccatgtgagagctttgatt
cttgaacctacgcgggaacttgccgttcagacttgcactgaaataaagtcgtttgttttt
gataaatatcccagatcggcggtcgtttacggcggcgcttccatgggaatgcaaataaag
gacttaaagcgcggagcggagatcgtcgtgggaactccggggcgtattcaggatcatctt
gaacgcggcagtttgaacattgaaaaaatcgattattttatccttgacgaaggcgatgaa
atgcttgatatggggtttatcgaggatatcgaagccatttttgcaaaggcgaatccttca
agcaggattcttttgttcagcgcgactatgcccgaacccattctcaagatcgctcataaa
tttatgggcgagtatgaaataattgaagaagaaggaataacggaagagccgctcttaatt
gaccaaaaatattgggttgtgcgtgaaaatgaaaagatagaggctctagtacgccttata
gatatttctccggatttttacggccttgtgtttacgcagaccaaggtcgacgcggacgcc
gtaagccgcatgcttgacgagcgcggatacgaagcttccgccctgcacggcgatattccg
cagcttcagcgtgaaaaaatccttatgcgattcagaagcaaaaaaacgcgcgtccttgta
gccacggatgtagccgcccgaggtatagacattacggggctgagccacgttgtaaattat
tctttgccttttgacggagctacctatgttcatcgcataggcaggacggggcgcgccggt
tcgtcgggatgcgcagtaacctttgtaaggcctgacgaacgtagaaaacttaagtttatg
caagcggctgtgcggcgcgcaagcaagggtgaaatgatcgaagaagaaattccttccgta
gatgcagttattgaggcaaagcgtaaacgattgttcgatgagattaaagtatctctcggt
gtttccgagcctgctgaggcggacagtgttcggaacggcatatccgaacgatgtggggaa
gacgatcttctcggcagcgtttccgatccttctggggcaggcggtttcaatggcggcgtc
tctgaggcgaccgttttgggcgatattaacgatccggaaaatcacgtaaaggcgtctttt
atttttgaaaacctcgcggaacagttatgttccggtatatattcgaatcctaaagagatt
cttgcgagagtacttgaaaatttttacggtaaaactcttgacagatcgcgctacggtttg
atttcttcggtaaaatcttacggagaaggcggtcagataagattgtttgttcagctcggc
aggagggacggatacaatgcgcgttcgatagccgattattttagcaatttgctgcatatt
cccggacgtatggtcgataacattgacatatcttcaagtttcagccttgtaagtttgcct
gtctcggccggaaagaaggttcttgaaatgtcccgtaaagacaagggtttacctcacatg
catgttgacagtaaatccggcggaggctttgtcttaaattcccgtaccggtcgagaaggc
agagtcgggcgaggaaagtacggcagagcttttccgaacgatgtgcgttcgccgtcaggc
agggctaaaaggcgggcgggcaagggtttgaacaaagtcgaagggcgtaagggcggcgct
gaactgtataaaaaaaagaaatccggcgaggaaaggttttaa
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