Treponema pallidum Fribourg-Blanc: TPFB_0003
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Entry
TPFB_0003 CDS
T02651
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
tpb
Treponema pallidum Fribourg-Blanc
Pathway
tpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TPFB_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpb03400
]
TPFB_0003 (recF)
DNA repair and recombination proteins [BR:
tpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TPFB_0003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGK83646
LinkDB
All DBs
Position
2701..3834
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AA seq
377 aa
AA seq
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MLYQTRTAFTSLCLCKRSDSLPFLTVTAINFRNLAHHTIDISSPEVFFVGNNGQGKTNIL
EVLYLAAYGNSFRTRTESELYATHARSNEYRVKVMYRGEYTHTVQIFSKNGKKRIEKNLK
KIRTKKELISSIPCILFFHNDLDFVVGTPERRRFFLDQSLSMCNPLYLEYLQKYHALTKT
KNREIKEKRVQLLDALDTQIATVGFDLVQWRTQLVRDFNVIFTKYYERLGDLAQVRIEYK
PSWSDSSVEEIVHSLYKRRKHDLAMGMSMSGPHRDKIHFTRSQALFIPQASTGQRRLVSL
VLRMSQAVFYTGVTGKLPVLLMDDVLLELDPEKRERFMMSLPPYDQLFCTFLPGEAYRRY
GREKTRVYFVSEGACHE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtaccaaacacggactgctttcacatcattatgcctatgcaaacggagtgattct
ttgccttttctcacagtgactgcaataaatttcagaaatcttgcacatcacacgattgat
atatcttctcctgaggttttttttgtgggaaataacggacagggaaaaaccaatatactt
gaggttctatatcttgctgcgtacggaaattcgtttcgaacacgcaccgaaagcgaactg
tatgcaactcacgcgcgttcgaatgagtatcgggtaaaagttatgtaccgcggggagtat
acccacacagtgcagattttctccaaaaatggaaaaaagcgcattgagaaaaacttgaaa
aaaataaggacaaaaaaagaacttatcagcagtattccctgtattttgttttttcataac
gatttggacttcgtagttggtacgccagaacgcagacgcttctttttggatcaatccctt
tcgatgtgtaatcctctgtatttggaatacttgcaaaaatatcacgcactaacaaaaaca
aagaacagagagataaaagagaaacgcgttcagttactcgatgcactggatacgcaaatt
gcaaccgtgggttttgatctcgtgcagtggagaactcagcttgtccgtgactttaacgtg
atttttactaagtattatgagcgccttggagaccttgcgcaggtgcgcattgagtataag
ccttcatggtctgactcctcagttgaggagatcgtacattctctttacaagagacgtaag
cacgatcttgcgatggggatgagtatgtcaggtcctcatagagataagattcactttact
cggtcgcaggcgcttttcattcctcaggcttctaccggacagaggcggttggtttcgttg
gtactgaggatgtcgcaggctgtgttctacacaggagtaacgggaaaactgcccgtactc
ttaatggatgatgtcttgttagagcttgatcctgagaagcgggaaaggttcatgatgagt
ttgcctccgtatgatcagctgttttgtacatttttgccaggggaagcgtacaggcgatac
gggcgtgaaaaaacgcgggtatattttgtttctgaaggggcgtgtcatgaataa
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