Treponema pallidum Fribourg-Blanc: TPFB_0005
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Entry
TPFB_0005 CDS
T02651
Symbol
gyrA
Name
(GenBank) cDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpb
Treponema pallidum Fribourg-Blanc
Brite
KEGG Orthology (KO) [BR:
tpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpb03032
]
TPFB_0005 (gyrA)
03400 DNA repair and recombination proteins [BR:
tpb03400
]
TPFB_0005 (gyrA)
Enzymes [BR:
tpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TPFB_0005 (gyrA)
DNA replication proteins [BR:
tpb03032
]
Prokaryotic type
DNA Topoisomerases
TPFB_0005 (gyrA)
DNA repair and recombination proteins [BR:
tpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TPFB_0005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AGK83648
LinkDB
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Position
4391..6832
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AA seq
813 aa
AA seq
DB search
MEEISTPEGGVLVPISIETEVKRAYIDYSMSVIVSRALPDVRDGLKPVHRRILYAMEEKG
LRFSGPTRKCAKIVGDVLGSFHPHGDASVYDALVRLGQDFSLRYPVIHPQGNFGTIGGDP
PAAYRYTEAKMARIAESMVEDIKKETVSFVPNFDDSDVEPTVLPGRFPFLLANGSSGIAV
GMTTNMPPHNLREIAAAISAYIENPNLSIQELCDCINGPDFPTGGIIFGKNGIRQSYETG
RGKIVVRARFTIETDSKGRDTIIFTEVPYQVNTTMLVMRIGELARAKVIEGIANVNDETS
DRTGLRIVVELKKGTPAQVVLNHLFAKTPLQSSFNVINLALVEGRPRMLTLKDLVRYFVE
HRVDVVTRRAHFELRKAQERIHLVRALIRALDAIDKIITLIRHSQNTELAKQRLREQFDF
DNVQAQAIVDMQMKRLTGLEVESLRTELKDLTELISSLEELLTSPQKVLGVVKKETRDIA
DMFGDDRRTDIVSNEIEYLDVEDFIQKEEMVILISHLGYIKRVPVSAYRNQNRGGKGSSS
ANLAAHDFISQIFTASTHDYVMFVTSRGRAYWLKVYGIPESGRANRGSHIKSLLMVATDE
EITAIVSLREFSNKSYVFMATARGVVKKVTTDNFVNAKTRGIIALKLSGGDTLVSAVLVQ
DEDEVMLITRQGKALRMSGREVREMGRNSSGVIGIKLTSEDLVAGVLRVSEQRKVLIMTE
NGYGKRVSFSEFSVHGRGTAGQKIYTQTDRKGAIIGALAVLDTDECMCITGQGKTIRVDV
CAISVLGRGAQGVRVLDIEPSDLVVGLSCVMQG
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattagcaccccagagggtggcgttcttgtgcccatttctatagagacagaa
gtcaagcgtgcttacatagactattctatgtccgtcatagtttctcgtgcgcttccggat
gtccgcgacggtttaaagcctgttcacagacgtattctctacgcgatggaggaaaaaggg
ctacgcttttcaggacctacacggaagtgtgccaagatagtgggggacgttttgggaagc
tttcatcctcatggggatgcgtccgtctatgacgcgctagtgcgtcttgggcaagatttt
tcccttcgttatccagtcattcatcctcaaggaaatttcgggactatcgggggcgaccct
ccggcagcgtatcggtacaccgaagcgaagatggcgcgtattgcagaatctatggtagag
gacataaaaaaggaaacggtttcctttgttcccaattttgacgattctgacgtagagccc
acggttcttcctggaaggtttccttttcttcttgcgaatgggtccagtggtattgcagtt
ggtatgactacaaacatgccaccgcataatttgcgtgagatagccgcagctatctctgcg
tacatcgagaacccaaatctttcgattcaggagttatgcgattgtatcaatggtcctgac
tttcccacgggaggcattatctttggaaagaacgggattaggcagtcttacgaaacaggt
cgagggaaaattgttgtccgtgctcgctttaccatcgagacggattcaaagggtagggat
accattatttttacagaagttccgtatcaagttaatactaccatgcttgttatgcgtatt
ggggaacttgcacgtgcgaaagtgatcgaaggtattgcgaatgtaaacgacgagacttcc
gatcgtacagggctacgcatagtggtagagctcaaaaagggtacccccgcacaggtagta
ctcaatcacctgtttgcaaagactcccctgcagtcctcttttaatgtgattaatcttgct
ttggtagagggaagacctcgaatgctcacgctcaaggacctagtgcgctactttgtagaa
caccgggtcgatgtagtgactcggcgtgcgcattttgaattacgtaaggctcaggagcgc
atacacttggtgcgtgcgctgatacgtgccttggatgccattgataaaatcatcacgctt
atccgtcattcgcagaacacagagcttgcaaaacagcgtttgcgtgaacaatttgacttt
gacaacgtgcaggcgcaggcgatcgtagatatgcagatgaagcgcttgacaggtttggaa
gtcgagagtttgcgtacggaattgaaagatttgacggagctgatttcttctctggaggag
ttacttacttctccccaaaaggtcttgggagttgttaagaaagagacgcgtgatatcgca
gatatgtttggggatgatcggcgtacagatattgtgagcaatgaaatagaatatctggat
gtagaagattttatccagaaagaggaaatggttattcttatttcccatcttggttacatt
aagcgcgttccagtgtctgcgtatagaaatcagaatcggggaggaaagggctcaagttca
gcgaatctggcggctcacgattttattagccagatatttactgcatcaacacatgactac
gtgatgtttgtcacgagccgtgggcgggcctattggctaaaagtatacgggattcctgaa
tctggtcgggcgaatcgtggttcgcatattaagtcgcttctcatggtagcgacggacgag
gagatcacggccatcgtatctttgagagagtttagtaataaaagttatgtttttatggct
actgcgcgaggtgtagttaaaaaggtaactactgataattttgtgaatgcgaagacgcgc
ggtattatagcgcttaagctgagcggaggtgacacgctggtgagcgcagtgttggtgcag
gacgaagatgaagtaatgcttattacgcgtcagggaaaagcattgcgcatgtcggggagg
gaggtgcgcgaaatgggtcgcaattccagtggggtgattgggataaaattgacgtccgag
gacctagtggcgggggttttgcgagtaagcgaacaacggaaagtactgataatgacggag
aatggatatggtaagcgggtcagtttttcagaattttctgtacatgggcgagggactgca
ggacagaagatttacacacaaacggatagaaaaggtgctataataggtgctcttgctgtt
ctcgatacagatgagtgtatgtgtattactggtcagggaaaaacgattcgcgtggacgtg
tgtgcaatcagcgtgctggggcgtggtgcgcagggcgtgcgtgtgttggatatcgagcca
tcggatttagtagtaggacttagttgtgtaatgcaggggtaa
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