Treponema pallidum Fribourg-Blanc: TPFB_0647
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Entry
TPFB_0647 CDS
T02651
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tpb
Treponema pallidum Fribourg-Blanc
Pathway
tpb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPFB_0647 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpb01007
]
TPFB_0647 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpb03016
]
TPFB_0647 (serS)
Enzymes [BR:
tpb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
TPFB_0647 (serS)
Amino acid related enzymes [BR:
tpb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TPFB_0647 (serS)
Transfer RNA biogenesis [BR:
tpb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TPFB_0647 (serS)
Prokaryotic type
TPFB_0647 (serS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AGK84293
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Position
complement(710836..712116)
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AA seq
426 aa
AA seq
DB search
MLDYRFIRENVDAVKENVKVRNVHADVDAIVHLYDQRVKLLAELQELQRARNENAQTMKS
SLDALARSACVETGRALKDRIAHSERLLVQISDQLLSATQALPNMTHMCTPHGRSDSDNL
EIKRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKREGVLLEQALIMFGL
QFLQERGFVPFLTPDIAREGMVCGLGFNPRGSGSNIYRIEGEHRCLVATAEITLGAYHAG
EVLEERSLPRLYAGLSHCFRKEAGAAGQFSRGLYRVHQFTKLEMFAYCTPSDSECLHERL
RSLEEEIFTALEIPFRVVEVCAGDLGAPAYRKWDLEAWMPGRQGGSWGEVTSASNCTDYQ
ARRLNVRYKDAEGKKHYVHMLNGTALAISRVLIALLENGQDAEGRVRIPQALVPFCGFEY
LYPRVL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgattatcggtttattagagagaacgtggatgcagtaaaagaaaatgtgaaggtc
aggaacgtgcatgcagatgtggacgcgattgtgcacctatatgatcagcgcgtaaagctt
ttagcagagttgcaagaattacaacgtgcgcgtaatgagaacgcacagacgatgaaaagc
tctttggatgcgcttgcgcgttcggcgtgtgttgaaacgggcagagcactaaaagatcgc
attgctcacagcgagcgtctattggtacagatttccgatcagcttttgtctgcaacgcaa
gcgttgccaaacatgacgcatatgtgcactccccatggtcgatcagacagtgataatctc
gaaatcaagcgctgtggggtgcctccatgctttagtttttcgccacgtgatcacgtggaa
ttagcgcgcttgctggatatagttgattttgaagcggggaaaaaggtctcggggataaag
ttttattatctgaagcgtgaaggggtgctgcttgaacaggcattgattatgtttggtttg
cagtttttacaagagcgcggttttgtgccatttctcactcctgacattgctcgtgagggt
atggtgtgtggtttgggttttaatccgcgggggagtggatcgaatatctatcgtattgag
ggagaacaccgctgtttagtagcaactgcagaaattacgctgggggcataccatgcaggc
gaggttcttgaagagcggagtttaccgcgtttatacgcagggctctcgcattgttttcgt
aaagaggctggtgctgcaggccagttttctcgcggtctttatcgcgtgcaccaattcacc
aaacttgaaatgtttgcgtactgtacaccgagtgattctgagtgcctgcacgaacgcctg
cggtcgcttgaggaagagatttttactgcattggaaattccttttcgtgtggtggaagtg
tgtgcgggagatttgggtgcgcctgcgtatcgcaagtgggatttggaggcgtggatgcct
ggacgccagggtggttcgtggggagaggtgacttctgcgtcgaattgcacagactatcag
gcgcggcgcttgaatgtccgctataaggatgcagaagggaagaagcattatgtacacatg
ttgaatgggacggcgcttgcaatttctcgcgtgttaattgcgctgctagaaaatgggcag
gatgcggaaggtcgcgtgcgcattccgcaagctttggtgccgttttgtggttttgagtat
ctctatcctcgtgtcctgtag
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