Treponema pallidum Fribourg-Blanc: TPFB_0889
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Entry
TPFB_0889 CDS
T02651
Symbol
truB
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpb
Treponema pallidum Fribourg-Blanc
Brite
KEGG Orthology (KO) [BR:
tpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpb03016
]
TPFB_0889 (truB)
Enzymes [BR:
tpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TPFB_0889 (truB)
Transfer RNA biogenesis [BR:
tpb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TPFB_0889 (truB)
Prokaryotic type
TPFB_0889 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGK84544
LinkDB
All DBs
Position
complement(969073..970173)
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AA seq
366 aa
AA seq
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MCRLSMPDAIVPFAKVSGLTSFAALAQVRRLLGVKKVGHTGTLDRFADGLLLLLVGGFTK
LAPVMTRLEKSYEARIQFGVQTDTLDPEGAVVRCSLFPTFARVRAALPHFTGSIDQVPPE
YSALKFGGVRASDRVRRGEAVCMKARRVFVFDLQVLGCEADLGEFKKTQAGRGAAIADLD
LTRVRAVTLYVRCSAGFYVRALARDIAAACGSCAYVSHLRRTRIGPFDLAQAAGVSRLGS
WTWGKERASCGAACFDVGAPPPPSSGGVATDSVSVGCEDLTVREIKQAVVSCDVDFANRI
GLTACSVHAQYASRFLHGERIRACWFQSFGTRRPGERALVFSEGRCLGLIRKAANGFSYD
AVFCTE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcagactgagcatgcctgacgctattgttcctttcgcaaaggtttccggtcttacg
agttttgcggcactggcacaggtcaggcgtcttctgggagtaaaaaaggtagggcatacg
gggacgcttgatcgctttgctgatgggctgctgttgcttttggtagggggctttaccaaa
ctcgcgccggtgatgactcgcttggaaaagagttacgaggctcgtatccagtttggggta
caaacagacactctagatccggagggggctgtcgtgcggtgctccttgttcccaacattt
gcgcgcgtgcgtgcggcgctgcctcacttcactgggagtattgatcaggtgccgcctgaa
tattcggcgctaaaattcggaggtgtgcgtgcgtccgaccgggtgcggcgtggggaagca
gtgtgcatgaaggctcggcgtgtgttcgtctttgacttgcaggtactaggttgcgaggcg
gatctgggtgaattcaaaaagacgcaggcggggaggggggctgcgattgctgatcttgat
ctgacgcgcgtgcgtgctgtaacgctgtacgtacgttgttcggcaggcttctacgtgcgt
gcacttgcgcgcgacatagcagccgcttgcggctcttgcgcgtatgtttcacatttacgg
agaacacgcattggaccctttgatcttgcacaggcggcgggtgtgtctcgtctcgggtcc
tggacatggggtaaagagcgtgcgtcttgcggtgccgcttgctttgatgtgggtgctcca
ccgcctccgtcctcaggcggcgtggcgaccgattcagtctctgtcgggtgtgaagacttg
acggtgcgtgagattaagcaggcagtggttagctgtgatgtggactttgcgaatcgtatt
ggacttacggcgtgttcagtgcatgcgcagtatgcgtcgcggtttttgcatggggaaaga
atacgcgcatgttggttccagtcgtttggtacgcgaaggcccggggaacgtgcgttggtg
ttttccgagggtcgctgtcttggattaataaggaaagcggcgaatgggttttcgtatgat
gcggtattttgtacggagtga
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