Treponema pallidum subsp. pertenue CDC2: TPECDC2_0043
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Entry
TPECDC2_0043 CDS
T01749
Name
(GenBank) putative lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tpc
Treponema pallidum subsp. pertenue CDC2
Brite
KEGG Orthology (KO) [BR:
tpc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpc01011
]
TPECDC2_0043
Enzymes [BR:
tpc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TPECDC2_0043
Peptidoglycan biosynthesis and degradation proteins [BR:
tpc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TPECDC2_0043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
AEZ58224
LinkDB
All DBs
Position
50423..52555
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AA seq
710 aa
AA seq
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MKFRHGKHLVWGGGFFSLLREGRLCLRVWCVVCVLVSWEGTVCARGAREVDIPQFLRDKN
YTPFLKPTDEFLEQVAAREGASYFIGLHLKRAKFSEEAHEYFVRGAAQAAPYRQLCAHEA
HNTGSPLQRLAFIEKQLHVLNAGSDAQTKTQQQTLRLLRSRVLFELERYYSLRTVVESWY
NDRALAPHTSAQFAALIAALPDLPRIFKEVHGARVDVFHRNYKRGWERVRLLLRSSAWHT
RYATNSVLSDFGKAALYGSENSVKAAQVFLDHLAHLSRSTLSNAELEARLRFYCYFYAAR
LYSRSASHKKQALPLFKKAEKVATRRQDADNALWYYLDVLRALDFDSFFKVLVESAPRWR
SDSWFSDLVDYAIVQLTTQQDWGRLATLQEVLTHRALPERSARVTYVLARSGTLSEESAR
RAYRTIFETAHSSLYYRVLAACALGIPLEEALYKVRSKRTPHPFLTPDESRAILQGYVDY
HLDDMFYQAMVQFYPDIPLHLAEHFANAHIQRSRWSDAVRIQSYAIRSHGARYSVEHLKI
AYPRPWLDVIQGYAGKYHIEEYLLFALIRSESLFQPQVISRAGAVGLAQLMRPTASDIAR
KLNIDTYDLTDPDINVRFGSLFFSDLIRRFDGSVFCALFSYNAGPSRVRKWKKQRGSLPD
DLFLETLPLAEPREYGRKILSAAVMYGYLYYQKQASDVVCALLPEFCRAS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattccgtcacggtaagcatctcgtgtggggaggtggctttttctctctcttacgg
gagggcaggttgtgcctgcgcgtgtggtgcgtggtgtgtgtccttgtctcgtgggagggc
actgtgtgcgcgcgcggcgctagggaggttgatatccctcagtttttgagagacaaaaac
tacactccgtttctaaagccaacagatgagtttctcgagcaggtcgccgcgcgggaaggt
gcaagttacttcattgggttacacctcaagcgggccaagttttccgaagaagctcacgag
tacttcgtacgtggcgcagcgcaggccgcaccgtaccgccagttatgtgcgcatgaggca
cacaatacagggagtccactacagcgtctcgcctttattgaaaaacagctgcatgtcctt
aatgcaggcagcgatgcgcaaaccaaaacgcagcaacagacacttcgccttttgcgttca
agggtgctctttgaactcgaacgctactacagtctgagaacggttgttgagtcttggtac
aacgatagggcacttgcgccccatacgagtgcacaatttgctgcgcttattgcggcactg
ccggatctgccgcgtatctttaaggaagtacatggtgctcgtgtggacgtctttcacagg
aattacaaacgggggtgggagagagtgcgattgttgttgcgctcttctgcgtggcacacg
cggtacgctacaaattcggttctctccgattttgggaaagcagcgctttacggtagtgaa
aacagtgttaaagccgcgcaggtttttcttgaccatcttgcacatctatcgcgctcaacg
ttgtccaatgcggaattagaggcacgactgcgtttttattgctatttttatgcggcgcgt
ctttactcgcggtccgcttctcacaagaagcaagcgcttccccttttcaaaaaggcagag
aaagtggccacaaggcggcaagatgctgataatgccctgtggtattacttggacgtactg
cgtgcattggactttgattctttctttaaggtgcttgttgaaagtgcaccacgttggcgt
tcggattcttggttttctgaccttgtcgattatgcaattgtccagctgactacgcagcaa
gattgggggcgtctggctacactgcaagaggtgctgacgcatagagcattacccgagcgc
tccgcgcgcgttacgtatgtccttgcgcgttcaggtacgctttcagaagagagtgcgcgc
cgcgcttaccgtaccatcttcgaaactgcgcattcttccctttactatcgtgttcttgct
gcatgtgcattgggcattcctctggaagaggctttgtataaggtgcggagtaagagaaca
ccgcatccttttcttacccccgatgagtcgcgtgctattctccaaggttatgtagactat
cacttggacgatatgttctaccaagctatggtacagttctatcctgacattcctctccac
cttgcagagcattttgcgaacgcacacatacaaagatcacgatggtccgatgccgtgcgc
attcagtcgtacgcaatacgctctcacggtgcgcgctattctgtagaacacttgaagatt
gcgtacccgcgtccgtggcttgacgtcatacaaggctatgcagggaagtatcatattgag
gagtatctgctgtttgcgctcatccggagtgaaagtctgtttcagccgcaggttatctct
cgggcgggcgctgtaggtcttgctcaattgatgaggccaaccgcttcagatatcgctcgt
aagctcaatatcgacacctatgacttaactgacccggatatcaatgttagattcggcagt
ctgttcttttccgatctcattcgtcgctttgatggctccgtgttctgtgccctgttctcc
tacaatgcgggaccgtcgcgcgtccgcaaatggaaaaaacagaggggaagtctgcccgat
gatctgttcctcgaaaccctgcctcttgcagaacctcgggagtacgggaggaagatccta
tccgcagcggtgatgtacgggtacctttattatcagaaacaggcttcagatgttgtgtgt
gcgttgcttcctgaattctgtcgtgcttcctga
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