Treponema pallidum subsp. pertenue CDC2: TPECDC2_0898
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Entry
TPECDC2_0898 CDS
T01749
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta subunit
Organism
tpc
Treponema pallidum subsp. pertenue CDC2
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEZ59101
LinkDB
All DBs
Position
complement(977916..981635)
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AA seq
1239 aa
AA seq
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MTDFLFSFFQSLNAEQRRAVFSSHNAVVTAGAGSGKTKVISARYIHLVVERAIPVERIVV
LTFTRKAAMEMARRIYEDLRLCVQSASAQPEPGHEAYLLRAREALARFGEARIMTLDAFS
HEIARVGARFFGIAPDFSLSEEENRALAHECAEDFFLEHREHPVVLHFLQQEHAEDCVRE
LFFIPLQDHGILTHPCDFRAGLAHQIATARGLLKTVLCDIHAALHAIRHHMQEADAQNAL
IARCVALFAAQDTAFSYTPAAEADAIADAFLARGYEEYAAKPDEFSVSDPDEGARRAAHD
CLRYCAAVKTLFCLKGNLGGRAGAAQAIKAQVKQLRLQLVPQMERLHAFFAQVPFLVALS
SLLERLQARFIRQKRERNCLSHADVAHLAVQVLRQYPEIRVSYKRGIDAFMIDEFQDNNA
LQKELLFFLAEHEARTAHFLPPAHALCAHKLFFVGDEKQSIYAFRGADVRVFRALAGVLT
PQVSGASKQELPLSAAAELQPTLQTLRINYRTEAALLERLNILFSHILRGPSESAENGYE
VGFQYMQPARCTAGIEPQFRVIGVDRHRFSRPEHEAQHSAARPTPQAGRTGASEDSEDSL
SAQETEAWALARAIRAMVDGGTLVRHKGEAPRACTWADVVILLRSADKQSRYERALRLWG
IPYTSLQTRGMFCDAPLSDLLAPLRLVLEPADRHVYAQVLRGPFVRVDDDTLSLLLLPPA
PPDAPFSYIPAELSAPAARCVRAGADFFARVQQQVRRLATNTELLTYLWYTEAYGTLLAQ
DPLARPYHVIYDYAFELARRADRQGKGIGEFLDFVDACLSAQERVEELELPCTDRACGAV
QIMSVHKSKGLEFPIVCVPDAGSSGPQVMARVGAVHSPYGYIPRFLPHPEGVHPIFVQEQ
DTRARAYRAELRRVLYVAFTRAECHVIVSGVLPISDGHPAPAVSRSLADICSLLPSGDGS
EPPSSLSFFSELLPALMHAAPLPPHPSPSVVPAPVSFDECLPLARPQAYQRALTGSARQS
VPQASAPRDWYAAVPVRAPHYYPRLVQPVTSLVSPAPGQNSASASPSPLTPQSPRGVEFG
THVHELLAQVFQSPAPTVALHSVQRVDSPAARLVACFLHSPLGCRACAAPAHQRFAEFSF
LTRAPGNTKPPHGAEYQAGTIDLLFLSNGVWHLVDYKTDYEEHPARYLPQLQHYARAVQD
LFSDHPVTAFLYYLRTGHEFSLEALESHFLKKNAVPDSE
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattttcttttttctttttttcaaagtttgaatgcagagcagcggcgtgcagtt
ttttcttcgcataatgcagttgttaccgcaggtgcaggttcgggtaagacgaaggttatt
agcgcgcggtatatacacctggttgtggagcgggcaattccggttgaacggattgtggtg
ctcacctttaccagaaaggcggccatggaaatggcgcgcagaatttatgaggacctccgt
ctgtgtgtacagagtgcgtctgcgcagccggagccggggcacgaagcgtatctgctgcgt
gcgcgtgaggcgcttgcgcggtttggggaagcgcgcattatgacgttagatgccttttcg
cacgaaattgcgcgggtaggcgcgcgctttttcggtatcgcgcctgatttttctctcagt
gaggaagagaaccgcgcgctggcacacgagtgtgcagaagatttttttcttgagcatcgg
gaacatccagtggtactgcattttttgcagcaggagcacgccgaagactgcgtgcgagaa
cttttttttattcccttgcaggatcacggcatacttacacatccctgtgactttcgtgca
gggcttgcgcatcaaattgctacagcgcgtgggttattaaaaacggtgctctgcgatata
cacgcggcattgcacgccattcggcaccatatgcaagaggcagatgcgcagaatgcgctc
attgcgcgctgcgttgcgctgtttgcggcgcaggatactgccttttcctacacgccggct
gcagaagcagatgcgattgccgacgcgtttttggcacgtgggtacgaggaatatgcagct
aaacctgatgagttttctgtgtctgaccctgatgagggagcgcggcgcgctgcacacgat
tgcctgcggtattgtgcggcggtaaaaacgcttttttgtctgaagggtaatttagggggg
cgcgcgggtgcagcacaggcgataaaagcacaggtaaagcagctgcgtcttcaacttgta
ccgcaaatggaacggctgcacgcgttttttgcgcaggtaccgttccttgtggcactcagc
tcgttgctcgagcgtctgcaggcgcgttttatccggcaaaaacgggaacggaattgtctc
agtcacgccgatgtggcgcatcttgcggtgcaggtgttacgtcagtatccggaaatacgc
gtttcttacaagcggggtatcgatgcgttcatgattgacgagtttcaagataacaatgcc
ctccagaaggaacttcttttttttcttgccgagcacgaagcgcgcaccgcgcacttcctc
cctcctgcacatgcgttgtgcgcacacaagttgttttttgtgggagatgaaaagcagtcg
atttatgcgttccggggtgcggatgtgcgggtattccgggctctggcaggcgtactcact
ccgcaggtcagtggcgcgtccaagcaggagcttcctctttccgctgctgcggagctgcag
cccacacttcagacgttgcgtatcaattaccgaacagaagcggcgctccttgagcgcctc
aacatactgttttcacatattttgcgtgggccgtctgagtctgccgagaacgggtacgag
gttgggtttcagtatatgcagccggcccggtgtactgccggtattgagccgcagtttcgg
gtgattggagtggatcgtcaccgtttctccagaccggagcacgaagcgcagcactcagct
gcgcgcccaacccctcaagcagggaggacaggcgcgtctgaggactcggaggattctcta
tcggcgcaggagacagaagcgtgggcgcttgcgcgtgctatccgtgccatggtggacggc
ggcaccctggtgcgccacaagggggaggcgccgcgcgcgtgcacgtgggcggacgtagtg
attctgttgcgttctgcagacaagcagtcgcggtacgagcgcgcgctgcgtctgtggggt
attccgtacacgtcgcttcaaacgcggggtatgttttgcgatgcgccgctgtctgatctc
cttgccccgctgcgtttagtgctcgagcctgccgatcggcatgtgtacgcgcaagtgctc
cgcggtccgtttgtacgggtcgatgacgacacgctttctctgttgctgctcccacccgca
ccccccgacgcccctttttcgtatatccccgcggagttatcggcgcctgcggcgcggtgt
gtacgtgcaggcgcggacttttttgcgcgcgtgcagcagcaggtgcggcgcctggcgacg
aataccgagctgctgacctatctgtggtacaccgaggcgtatggaacgctgcttgcgcaa
gaccccctggcgcgtccgtaccatgtgatatacgactatgcgtttgagcttgcgcggcgg
gcagatcggcagggaaaggggataggagaatttttagattttgtagatgcgtgtctgtct
gcccaggagcgggtagaggagctggagctgccttgcacggaccgcgcgtgtggggcagtg
cagattatgagcgtgcacaaaagcaaggggcttgagtttccaattgtgtgtgtgccggac
gcggggagttctggaccgcaagtgatggcgcgcgtaggcgcggtacactccccgtacgga
tacattccccgatttttgcctcaccctgagggggtgcatccgatctttgtgcaggaacaa
gacacgcgcgcccgggcgtaccgcgcggagctgcgacgcgtgctctatgtggctttcacg
cgggctgagtgccacgtgattgtcagcggggtactgcctatttctgacggacatcctgct
cctgccgtttctcggtcgttggcggacatctgctctctgctcccctctggtgacgggagt
gagcctccttcctccctctctttcttttcagagctgctccctgcgcttatgcatgcagcc
ccccttcctccccatccttctccctctgtggtgcccgcaccggtgtcgtttgatgagtgt
ctgccgctggcgcgccctcaggcgtatcagcgcgccctcaccgggtcagctcgccaaagc
gtgccgcaagcatccgcccctcgggattggtacgctgcagtgcctgttcgcgcaccccat
tattatccccgtcttgttcagccggtgacgtccctggtttctccggctccggggcaaaac
tcggcttccgcttctccttcgcccttgaccccgcagtccccccgtggcgtggagtttggc
acgcacgtgcatgagcttttggcgcaggttttccagtccccggcgccgaccgttgcactc
catagcgtacaacgtgttgattcccctgcggcacgccttgtggcctgctttcttcactcc
cccttgggctgccgtgcatgtgcagcccccgctcaccagcgttttgcggagttttccttt
ctcacccgcgctccaggtaatacgaaacccccacatggagcggagtaccaagccggcacc
attgatctcctcttcctttccaatggggtgtggcaccttgtggactacaaaaccgattac
gaagagcacccggcgcgttatctcccccagttgcagcactatgcacgggcggtgcaggat
ctcttctcggaccacccggtgacggcctttctgtattacctccgaaccgggcatgaattt
tctttggaagcgttagaatctcattttctgaaaaaaaacgcagttccggattctgaatga
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