Thermoanaerobacter pseudethanolicus: Teth39_0729
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Entry
Teth39_0729 CDS
T00649
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
tpd
Thermoanaerobacter pseudethanolicus
Pathway
tpd02020
Two-component system
tpd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Teth39_0729
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Teth39_0729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpd03021
]
Teth39_0729
Transcription machinery [BR:
tpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Teth39_0729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_Crp_2
HTH_23
Sigma70_r4_2
Sigma70_r4
HTH_26
Xre-like-HTH
HTH_29
HTH_28
HTH_Tnp_ISL3
DNA_pol3_delta_C
HTH_24
MarR
Chorismate_bind_2
Phage_CII
MarR_2
HTH_31
Arg_repressor
LacI
WHD_RNase_R
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ABY94389
UniProt:
B0K876
LinkDB
All DBs
Position
780409..781773
Genome browser
AA seq
454 aa
AA seq
DB search
MRMEFDLKLQQTQKLIMTPELKQAIEILQLNSLELNALIEQELETNPLLEKEEVIEEDIY
ESNDFTELAKYIRETEERMYYDDSDDEEIEEVNYENFVSTKPSLTDHLLFQLHITPVSPK
IQKICEYIIFSLSPSGYLREDIKDIAEILECTEEEVLEGLSIVQSFDPPGIAARNLQECL
KLQLLAQDSYKGIVKELVDYHLEEIAEGKYSYLAKLYNISLKEVQQAVDFIKKLNPKPGS
SFSSTADVRYIVPDVEVIKREGEYFVIVNDSVTPKLKINNYYHSILNSHDEEAKKYINSK
LQSAMWLIKSLESRKETLYKVVKAIVELQRDFLDKGINYLKPMTQKQIADIVGIHESTVS
RAINGKYVATPRGLFELKFFFQSGISNKNGNEFSAETIKNLIKKLIEEEDPTNPLSDQKI
ADILKEKNINISRRTVAKYREECNIPSTIKRRRY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggaattcgatttaaaacttcaacaaactcaaaaacttataatgactcctgaa
ctaaaacaggctattgagattttacaattaaattccttagaacttaatgctcttatagaa
caggaattagagactaatcctcttcttgaaaaagaagaagttatcgaagaagatatatat
gaatctaatgattttactgagttggctaaatatatacgagaaacagaagagagaatgtat
tatgatgattccgatgatgaagaaatagaagaagtcaattatgaaaactttgtgtccaca
aagccttctttgactgaccaccttttgttccaacttcacataacccctgtttctcctaaa
atccagaaaatatgtgaatatataatatttagtctaagtccgagtggttatttgagagag
gatataaaagatattgcggaaattctggaatgtactgaagaagaggtattagaaggatta
tctatagttcaatcttttgaccccccaggaattgcagcacgtaatttgcaagaatgttta
aaacttcagcttttagcccaagatagttacaaaggcattgtaaaagaattggtagactat
catcttgaggaaattgctgaggggaagtattcatacttagcaaagttgtataatatttcc
ctaaaagaagtgcaacaagctgtagattttataaaaaaactcaatcctaaaccgggaagc
agcttttcttctacagcagatgttagatatattgtaccagatgtggaggtaataaaaaga
gagggagagtattttgttatagtaaacgattcagtcactcctaagctcaagattaataat
tactatcattctattttaaatagccatgatgaagaagctaaaaaatatataaattcaaaa
ctgcaatcagccatgtggcttataaagagtttagaaagtagaaaagaaactttgtataaa
gtagttaaagcaatagtggagttacaaagggattttcttgacaaaggtatcaattactta
aagcctatgacacaaaaacaaattgctgatattgtaggtatccatgaatctactgtcagc
agagctataaatgggaaatatgttgcgactccaagagggctttttgaactaaaatttttc
tttcaatctggaatttctaataaaaatgggaatgaattttctgctgaaactattaaaaat
ctcataaaaaaattgatcgaagaagaagatccaacaaatcctttaagtgaccagaaaata
gcggatattttaaaagaaaaaaatattaatatttcaagaagaacagtggcaaaatataga
gaggaatgcaacattccttctactatcaaaagaagaagatattaa
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