Thermoanaerobacter pseudethanolicus: Teth39_1214
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Entry
Teth39_1214 CDS
T00649
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tpd
Thermoanaerobacter pseudethanolicus
Pathway
tpd03030
DNA replication
tpd03430
Mismatch repair
tpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Teth39_1214
03430 Mismatch repair
Teth39_1214
03440 Homologous recombination
Teth39_1214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpd03032
]
Teth39_1214
03400 DNA repair and recombination proteins [BR:
tpd03400
]
Teth39_1214
Enzymes [BR:
tpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Teth39_1214
DNA replication proteins [BR:
tpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Teth39_1214
DNA repair and recombination proteins [BR:
tpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Teth39_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
HHH_3
tRNA_anti_2
DNA_pol3_a_NI
Radical_SAM
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ABY94868
UniProt:
B0K9Q5
LinkDB
All DBs
Position
complement(1261171..1265394)
Genome browser
AA seq
1407 aa
AA seq
DB search
MIPASFPQEFEIKKVKLLKKERKLIVSVSSNNNINSQIRKFQDFLLNKFPLIKEVEVVVE
QEKKFNSLQDILDNFEEIILKISEEYPASLSFLKTCDVVTENQKIIIKAPNEVVYQFIKS
NKIDFVLKKFLKDKYGFKTEIDVVLLEEFEDTMERMIMEEDIKVIEEITKSGQKQETGKT
TEKMEDKEDSQVLLGKEIKAEVISIKDVTAETEEAVIEGEIFSLEFKELKSKILMTFDIT
DYTSSILVKAFLTEEKYNYLKENIQVGSFVKLRGKVFYDKYEGDLVISLKDLQLISPKER
KDLSEEKRVELHLHTQMSSMDAVASATEVIKRAAKWGHKAIAITDHAVVQAFPEAMEASS
KYGVKVIYGVEGYLVDDGVPIVTGDTEATLEDEFTVFDIETTGLSNINDEIIEIGAVKIK
EGKIIDTFETFVNPKIPISSFITKLTGIDESMVKDAPSIEEILPKFLEFASNSVLVAHNA
NFDVSFIKSKAKKFNLNVNNAVLDTLELSRHLYKDLKNYKLDTLADHLQVKLEHHHRAVD
DAMATAEIFIKTIDRLKELGVEKVKDINAILKESEVDIRKLPVYHVTILVKDQKGLRNLY
EIISKSNLEYFHRTPRIPKSLLISRREGLIIGSACEQGEVFRAIVSNLEEKKLENIISFY
DYLEVQPVGNNEFLIGKGEVKSVEELREINRKIYLLGKKYNKLVVATGDVHFLDPWDDIY
RKILMAGKGYKDADRQPPLYFKTTDEMLKEFEYLGEEVAKEIVIDNPNKIADLVEEVKPI
PDGTFPPVIEGAEEELRKLTLDKAHEIYGDPLPEIVQNRLDRELNSIINNGYAVMYIIAQ
KLVSKSLKDGYLVGSRGSVGSSLVATMSGITEVNPLPPHYVCPNCKYSEFITDGSYGCGV
DMPDKTCPHCGTLMRKDGFDIPFEVFLGFEGDKEPDIDLNFSGEYQPIAHKYTEELFGKG
HVFRAGTIGTLADKTAYGYVKKYFEERNLIVHKSEIKRLTVGCTGVKRTTGQHPGGIMVV
PKDKSIYDFTPIQHPADAEDTDVITTHFDYHSISGRLLKLDILGHDDPTVIRMLEDLTGI
NAREIPLDDKKTMSLFTSVEALGIDPEELNTPVGTLGLPEFGTKFVRQMLIDTRPTTFAE
LVRISGLSHGTDVWLNNAQDIIREGIATLKEVISTRDDIMLYLISKGMDKKLSFKIMENV
RKGKGVTQEEIEEMRKHGVPNWFIESCQKIKYMFPKAHAVAYVIMAFRIAYFKVHYPEAF
YATYFTVRADDFNLDIVLKGKDSIKNAIKEIEAKGNNASPKEKSLLTVLEVALEMYLRGF
KFINVDLYKSDAVKFFITEEGLLPPLNSLEGVGIQAAKTIAQERENGKFLSVEDFRNRTK
VSKTVIEILKQYGCLTDLPESNQLSLF
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgattccagcatcttttccgcaggaatttgaaataaaaaaagtaaaactgttaaaaaaa
gagagaaaattaattgtaagcgtatcttccaataataacataaattctcagataagaaaa
tttcaggattttttgcttaataaatttcctttaattaaagaagtagaagtcgtagtagaa
caggagaaaaaatttaatagtcttcaggacatattagacaattttgaggaaataatctta
aaaataagcgaagaataccctgcttctcttagttttttaaaaacctgtgatgtagtaaca
gagaatcaaaagataataattaaagctcccaacgaagtagtctatcaatttataaaaagc
aataaaattgattttgttcttaagaaatttctaaaggataaatatgggtttaaaacagaa
atagatgtagtccttttagaagagtttgaagatacaatggaaagaatgataatggaggaa
gatataaaagttattgaagaaatcactaaaagcgggcagaagcaagaaaccggcaaaaca
acagaaaaaatggaggataaagaagattcccaagtacttttagggaaagaaataaaggct
gaagtgatatctatcaaagatgttactgcagaaacagaagaagcggtaattgaaggtgaa
atcttttctctagaatttaaggaattaaagtctaaaattttaatgacttttgatataact
gattatacttcatcgatacttgtaaaagcctttttaactgaggaaaagtataattattta
aaagagaatatccaagtaggcagttttgtaaaattaagagggaaagttttctacgacaaa
tatgaaggagacttagtaataagtctaaaagacctgcagttgatatctccgaaagaaaga
aaagatttaagtgaggaaaaaagagtggaacttcacttacacactcaaatgagcagtatg
gatgcagtagcctctgcaacagaagtgattaaaagagcagcaaaatggggacataaagcc
attgctataacagaccatgcagttgtacaagcatttcctgaagcgatggaagcatcttct
aaatacggtgtaaaagtcatatacggtgtagaaggttatttagtggatgatggtgtacct
attgtaacaggagatacagaagccactttagaagatgaatttactgtttttgatatagag
acgacgggtctttccaatataaatgatgaaataattgaaattggtgcagtaaaaataaaa
gaaggcaaaataatagatacttttgaaacctttgttaatcccaaaattcctatttcttct
tttataacaaaacttactggaattgacgaatctatggttaaagatgctccttctatagaa
gaaatattacctaaattcttggagtttgcttctaacagtgttttagtagctcataatgca
aattttgatgtgtcttttataaaatctaaagctaaaaaatttaatttaaatgtaaacaat
gcagttttagataccttagaactaagtagacatttatataaggacttgaaaaattacaag
ctagacacactggctgaccatttacaagtaaaattggaacaccaccacagagcagtagac
gatgctatggctacagctgaaatatttataaaaactattgataggttaaaagaattagga
gtagaaaaggtaaaagatataaatgctatattaaaagaaagtgaagttgacatacggaaa
cttcctgtctatcatgtcacgattttggtaaaagaccaaaaaggattgagaaatttatac
gaaataatctctaaatccaatttggaatattttcatagaacacctcgtattcccaaaagt
ttacttattagtaggagagaaggtcttatcattggttctgcttgtgaacaaggggaagtt
tttagggcgattgtatctaacttagaagaaaagaaactagagaatattatttctttttac
gattatttagaagtacagcctgttggaaataatgagtttttaattggaaaaggagaagta
aaaagcgtagaagaattaagagaaatcaatcgaaaaatttaccttttaggtaaaaaatac
aacaaattagtagtggcaacaggagatgtgcactttttagatccatgggatgatatatac
agaaaaattttaatggcaggaaaaggatataaggatgcagataggcagccgcctctttat
tttaaaacaactgatgagatgctaaaagaattcgaatatttaggagaagaagtagcgaaa
gagattgtaattgataatcctaataaaattgctgaccttgtagaagaagtaaaacctata
ccagatggaacattccctcctgtgatagagggagctgaagaagaattaagaaagcttact
ttagataaagcccatgaaatatacggtgaccctttgccagaaatagtacaaaatcgctta
gatagagaattaaattctataattaacaatggatatgcagttatgtatattatagctcaa
aaattagtgtctaagtctttaaaagatgggtatttggttggttctagaggttctgtaggc
tcttctttagtagccactatgagcggaataacagaagttaacccgctgccgcctcattat
gtttgtccaaattgtaagtattccgagtttataactgatggaagctatggttgtggtgtg
gacatgccggataagacttgtcctcactgtggaactttgatgaggaaagatggttttgat
ataccctttgaagtgtttttaggttttgaaggggataaagaaccagatatagaccttaat
ttttctggggaataccaacctattgctcataagtatacagaagaacttttcggaaaaggc
catgtttttagagcaggtactattggaactttagcagataaaactgcttatggatatgtc
aaaaaatattttgaagaacgcaatttaatagttcataaatcagaaatcaaaagacttact
gttggttgtacaggagtgaaaagaaccacagggcaacatccaggtggaataatggtagtg
ccaaaggacaagagtatttatgactttactccaatacagcatcctgctgatgcagaagac
accgatgttataacaactcattttgactaccattcaataagcggaaggcttttaaaactg
gatattttagggcatgatgaccctacagttataagaatgctggaggatttaaccggcatt
aatgcaagagaaattcctttagatgataaaaaaactatgagtttatttaccagtgtagaa
gcattgggaatagaccctgaagagctaaatactcctgtgggtactttaggattacctgag
tttggtacaaagtttgtaagacaaatgcttattgacactcgtcctactacttttgcagaa
ctagtacgcataagtggactttctcacggcactgatgtatggcttaacaatgctcaggat
ataataagagaaggaatagctacattaaaagaagtaatatctacaagagatgacataatg
ctttatttgataagcaaaggtatggacaaaaaattgtcttttaaaataatggaaaatgtg
aggaaaggcaaaggtgtaacacaagaagaaatagaagaaatgagaaaacacggtgttcca
aattggtttattgagtcttgccaaaaaataaaatatatgtttccgaaggctcatgctgtg
gcatacgtaataatggcatttcgaattgcttattttaaagttcattatccagaagccttt
tatgctacttactttaccgttagagcagatgactttaatttggatattgtattaaaaggg
aaagacagcataaaaaatgctataaaagagatagaagcgaaaggaaataatgctagtcct
aaagaaaaaagccttttaacagtattagaagtagctttagagatgtacctaagaggattt
aagtttataaatgtagacttatataaatctgatgcagtcaaattttttattactgaagaa
ggattgctaccacctcttaattctttagagggagtaggaatacaagcagccaaaacaatt
gcacaagaaagagaaaatggcaaatttctatctgttgaagattttagaaacagaacaaag
gtcagtaaaacagttatagaaatattaaaacagtatggctgtttaaccgatttgccagaa
tctaatcaattaagtttattttag
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