Thermoanaerobacter pseudethanolicus: Teth39_1321
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Entry
Teth39_1321 CDS
T00649
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tpd
Thermoanaerobacter pseudethanolicus
Pathway
tpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Teth39_1321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpd03400
]
Teth39_1321
Enzymes [BR:
tpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Teth39_1321
DNA repair and recombination proteins [BR:
tpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Teth39_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
Zn_Ribbon_TF
T4_MRH
Helicase_C_2
ADDB_N
MarR
TrmB
TrwB_AAD_bind
Viral_helicase1
AAA_19
VASP_tetra
Motif
Other DBs
NCBI-ProteinID:
ABY94975
UniProt:
B0KA12
LinkDB
All DBs
Position
complement(1355306..1357504)
Genome browser
AA seq
732 aa
AA seq
DB search
MFAEVVVDIKSSNTDRVYTYRIPEGMNVKIGMRVSVPFNNRFIEGYVISITDKASYSVDK
IKDIHRILDSYSIFDEKMIELAKWMKDYYKCYFSEALQTIMPVGIKQGEKKVKVVKINID
EIPSQLSKKAPKQYEILQYLKNRSPIRLSELVKVLNIDYGVIKSLQNKGYIEIYEEEVLR
FSVKDIEKTKPLLLTEEQQRAVEEVKRSILTGTFDKYLLFGVTGSGKTEVYLQLIDEAIK
IGKSAIVLVPEISLTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNGLVDVVVGV
RNAVFAPFNNLGLIIIDEEHETTYKQSDLRPKYNAKEVAEKRCEIEKAVLVMASATPSLE
TYYKANKGEYKLIRLTKRINVSMPQIEVVNMSEELASGNTSIFSRKLFSYIKENLKRKEQ
TILFLNRRGYSSFVSCRDCGYVPKCPNCDISLTYHFEDKKLVCHYCGYEETMKDTCPKCG
SKRIRYLGIGTERVENDIKKFFPNARVLRMDVDTTRKKGSHEKIFYDFRNGKADILIGTQ
MISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKPGRVVIQTYE
DDHYSIVTAKQQNYVKFYNEEIKYREIFRYPPFSHLMNIVVSGEKEEEVKNTAVSTYLTC
QKLINKLQNKSYNKILGPAPAPISKINNRYRWQVILKSEDRDILTEIAEEIQKMKYSKDI
RIAVDIDPLSIM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgaggtcgttgtagacattaaatcttctaatactgacagggtatatacttat
cgtattcctgaaggaatgaatgtaaaaattgggatgagggtatctgtcccctttaataat
aggtttatagagggatatgtaataagtattactgacaaggcgtcttattcagtggataaa
ataaaggatatccataggattttagacagctatagcatatttgatgaaaaaatgattgaa
ctggctaagtggatgaaggattattataaatgttatttttctgaagctctccagactata
atgcctgtagggataaagcaaggggaaaagaaagtaaaggttgtgaaaataaatattgat
gagataccttcacagctttccaaaaaggcgccaaagcaatacgaaatattacaatattta
aaaaatagaagtcctattaggctttctgagcttgtcaaggtgctcaatatagactatgga
gttataaaaagtttacaaaataaagggtatatagaaatttacgaggaagaagtattgaga
tttagtgtaaaagatattgaaaaaactaagcctctattattgacagaagaacaacaaaga
gctgtagaagaggttaaaaggtctatcttgacaggcacttttgataaatatttgcttttt
ggtgtaacaggaagtggcaaaactgaagtttatcttcaattgatagatgaagctataaaa
ataggcaaaagcgctatagttttagtaccagaaatctcattgacgcctcagactattgaa
aggtttgtgagtcgatttggcaatagagtggctgtaattcacagtggcctttcaccggga
gaacgttttgatgaatggagaaaagtaaaaaatggtttagtggacgtagtagttggtgtg
agaaatgcagtttttgctccttttaataatcttggcctcattataattgacgaggaacat
gagaccacctacaaacaatcagacttaagacctaaatataatgctaaagaagtggcagaa
aagcggtgtgaaatagaaaaagcagttctggttatggccagtgctactccttctttagag
acctattataaagctaataaaggagaatataaacttataagacttacaaaaaggattaat
gtttctatgccgcagatagaagttgtcaatatgagtgaggaattggcaagcggaaatact
tcaatatttagtcgcaaattattttcctatataaaagaaaatcttaaaaggaaagagcaa
actattctttttttaaacagaagaggatactcttcatttgtttcctgcagagattgcggt
tatgtgcctaaatgtcctaattgtgatatttctttaacttatcattttgaagataaaaaa
ttggtttgccattattgtggttatgaggagactatgaaagatacatgtcctaaatgtgga
agtaaaaggattaggtatttaggcatagggaccgaaagggtagaaaacgacataaaaaag
ttttttcctaatgcaagagttttgaggatggatgtagataccacaagaaaaaaagggtct
catgagaaaattttttatgactttagaaatggtaaggcagacattctaatcggtacgcaa
atgatatctaaaggctttgacattccaaatgttacgttggtgggagtaatacttgcagat
ataactttaaatcttcctgattttaggtccagtgagaggacttttcagctgctcactcag
gtagctggaagggcaggaagaggtgaaaagcctggaagagtagtaatacagacctatgaa
gatgaccactatagtatagttactgcaaaacagcaaaattatgtgaagttttacaacgaa
gagataaaatacagagaaatttttagataccctcctttttcacatctaatgaatatagtg
gtatcaggagaaaaggaggaagaggttaaaaatactgctgtaagcacttatttaacttgt
caaaagcttattaacaaacttcaaaataagagttataataaaatattaggacctgctcca
gctcctataagtaaaataaacaaccgatatagatggcaggtcattttaaaaagtgaagat
agagacatcttgacggagatagcagaagaaattcaaaagatgaaatattctaaagatata
aggatagctgtagacattgaccctttgagtataatgtaa
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