Thermoanaerobacter pseudethanolicus: Teth39_1331
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Entry
Teth39_1331 CDS
T00649
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tpd
Thermoanaerobacter pseudethanolicus
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpd03016
]
Teth39_1331
Enzymes [BR:
tpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Teth39_1331
Transfer RNA biogenesis [BR:
tpd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Teth39_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
RNA_binding
Hpr_kinase_N
SH3_CYT4
Motif
Other DBs
NCBI-ProteinID:
ABY94985
UniProt:
B0KA22
LinkDB
All DBs
Position
complement(1365356..1365904)
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AA seq
182 aa
AA seq
DB search
MRTFIGIDLDEKSIGKLSSFQEELKNYTIKGRWTHKDNFHITLKFLGEIETESVMKIKDS
LEVAVKDISPFYIKFDKVGFFKGNGDMRVLWVGTEENSFLNKLHDNIDEELYKIGFEKDK
RKFTSHITIARDIRLSIDIEEVNSLFEKQEKGAILVDTVFLYESVIQENRRKYIPIFSVP
LK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgtttattggaattgatttagatgaaaaatcaatagggaaattatcaagtttt
caggaagagttaaaaaattatacgataaaaggaagatggactcataaagataatttccat
attactttaaaatttctaggggaaatagaaacagaaagtgtaatgaaaataaaagactct
cttgaagtagcagtaaaagatattagtcccttttatataaaatttgacaaagtaggattt
tttaagggaaatggcgatatgcgagtattgtgggtaggtacagaagaaaattcctttctt
aataaactgcatgacaatatagatgaggaattatataaaattggctttgaaaaagataaa
agaaagtttacttcccacattaccattgccagagacatacgtttaagcattgacatagaa
gaagtaaatagtctttttgaaaaacaagaaaaaggagcaattttagtagatacagttttt
ttgtatgagagtgttatacaagaaaatagaagaaaatatattcctatatttagtgtgcct
ttaaaataa
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