Thermoanaerobacter pseudethanolicus: Teth39_2008
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Entry
Teth39_2008 CDS
T00649
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpd
Thermoanaerobacter pseudethanolicus
Brite
KEGG Orthology (KO) [BR:
tpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpd03400
]
Teth39_2008
DNA repair and recombination proteins [BR:
tpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Teth39_2008
Archaeal homologous recombinant proteins
Teth39_2008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_ATPase
DUF3450
ABC_tran
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABY95634
UniProt:
B0KDB5
LinkDB
All DBs
Position
complement(2060502..2064044)
Genome browser
AA seq
1180 aa
AA seq
DB search
MRKMRPLKLKIAGLNSFVEEQIIDFEVLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIP
RNSKDFINTQSTSMSLTYQFEIGVDGARKRYIVERNVKRDAKSGGYKTTLARLREIGESG
ERVLAEKDREVQQKIVDLIGLTAEDFTRSVVLPQGKFSEFLKLTGKERRDMLERIFGLEK
YGSKLLVRIRDVKREKSNLLNEVNAKLSQHEGVTKEALEDLKKKFEILKEEEKTLKEQKD
KLDKEREKLKGIWEKQQELNQFLHKKEVLDQQLKEIEDKKEKLKKAEKALSVKPYIDSLV
ETEKKLILNQKDVEKYSKELEEAEKLLEKVEKEYEASLKEKEEKIPLIIEKEERLKRAFK
LRDEIKKINSEREKLVKEYKDLKKQIDGIEREIKALSDSIDIAKRQLGEKEKRINEIKVD
SNKREKIFAAFEIQKEFERADKEKKEKEKRILELKELIGKQQKDIEKIDNLLKRKEKEIQ
EVDNNIKKLEMQKPPTNEDLLDLQKSLERKRVEILELKEKEKLKNEAENNLKEILKIKEE
INNEIKEIEEKLKNKNNSLEEVKKDIEELVKNNMAGELAEGLKEGVPCPVCGSIHHVRLA
QKVEEDLIKEKQEIKANLEKDIMDYQSKLFKLKGELSGIEVKEEMYKKEYDKLWDILKDI
NLLKLEEELNKMESDFIQWKEKLEKWNKSKEGLETLIKKLKEEKASLDLEHTRLKEGINK
DISLLKEFESSLEAISITYSELEGQLRISREELGISDFKEKVEEINQKEREIEGLRNEIE
NFKNTIEELTNKKETLSNNLNALSIRKGQIEEIGKEKSKNLRERQQEFDSLSEGRDIEEY
LKEIQYNKEKITKMESVLKETLEKARKDKQNIESKKISACKSRDLLNNMFREQSEKLENA
LLEKGFKDKKEALEYLLDSENIKKIEEEIKNFENEYVSVNKSIDRLMEILKGQKINEEEW
NQLEESIKGLEQVLNEKRKEIGATEKAISDMQENLQKVEEFTKQKKELERVVDILNELDN
LFQGNKFVDFIAARQLKYITFFASKRLKEISRGRYALEIDSDNNFVMRDDFNGGVRRSVD
TLSGGETFLTSLSLALALSSHIQLKGRAPLEFFFLDEGFGSLDAELLDIVMTSLERLKKD
KMVVGIISHVDELKGRVPVKLIVTPPAVSGEGSKVRIEYT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgagacctctgaagcttaaaattgctgggcttaatagttttgtagaagaa
caaattattgattttgaagtcctaacagaaaaaggactttttggcatatttggtcccaca
ggaagtggaaaatccactattatagatgcaattactctttcaatgtacgggaaaattccc
agaaatagcaaggattttataaatactcaatctacatctatgtctttgacataccagttt
gaaataggtgttgatggggcaagaaaaaggtatatagttgagagaaatgtaaaaagggac
gcaaaaagcggcggttataaaactacattagcaagactgcgggaaataggggaaagtgga
gaaagagttttggcagaaaaagatagggaagttcagcaaaaaatagtggatttaattgga
cttacagcagaggattttactcgttctgtagtgcttccacaagggaaatttagtgaattt
ttaaagctaacaggcaaagaaagaagggacatgttagagaggatttttggcttagaaaag
tatggaagcaaattacttgttagaataagagatgtaaagagagaaaaaagtaatttattg
aatgaggtaaatgcgaagttaagtcagcacgaaggtgttactaaagaagcattggaagat
ttaaagaaaaagtttgagattttaaaagaagaagagaaaactttaaaagaacaaaaggat
aaattagataaagaaagggaaaaacttaaagggatatgggaaaaacagcaggagttaaat
caatttttgcataagaaggaagtcttagaccagcaattaaaagaaatagaagataaaaag
gaaaagttaaaaaaagcggaaaaggcattatcagtaaaaccgtatatagactctttagtg
gagacagagaaaaaactcattttaaatcaaaaggatgtggaaaagtattctaaagagttg
gaggaggctgaaaaattacttgagaaggtagaaaaagaatatgaggcttcattaaaagaa
aaggaagaaaaaattcctctcataattgaaaaggaagaaaggcttaaaagggcttttaaa
ctgagagatgagataaaaaagattaatagtgaaagggagaaacttgtaaaggagtataaa
gatttaaaaaagcagatagatgggatagaaagagaaataaaagccctgtccgattctata
gatatagcaaaaagacagttgggtgagaaggaaaaaagaattaatgaaattaaagttgat
tcgaataaaagggaaaaaatttttgctgcttttgagattcagaaagagtttgaaagggca
gacaaagagaaaaaagaaaaggagaaaagaattttagaattaaaagagctaataggtaag
cagcagaaagatattgaaaaaatagataatttattgaaacgaaaagaaaaagaaatacaa
gaggttgacaataatataaaaaaacttgaaatgcaaaagcctcccacaaatgaagacctt
ttggacctgcaaaaaagtttagaaagaaaaagagtagaaattttagaattgaaagaaaaa
gaaaagttaaaaaatgaggcggaaaataatttaaaagaaattttaaaaataaaagaagaa
ataaataatgagataaaagagattgaagagaaattaaaaaataaaaataatagtttggaa
gaagtaaaaaaagatatagaggaacttgtaaaaaacaacatggcaggtgaactggcagag
ggattaaaagaaggtgttccctgtcctgtctgtggttcgattcatcatgtaagattggca
caaaaggtagaggaagacttaataaaagaaaagcaggaaataaaggcaaacttagaaaag
gatataatggactatcaaagtaagctttttaaattaaaaggtgaattatcaggaatagaa
gtcaaagaagagatgtataaaaaagaatatgataaactgtgggatatattaaaagacatt
aaccttttaaagttagaagaagaattaaataagatggagtctgattttatacagtggaaa
gaaaaattagaaaaatggaataagagtaaggaaggattagagaccttaattaaaaaatta
aaggaggaaaaagcaagtttagatttagaacatacaagattaaaagaaggtataaataaa
gatattagccttttgaaagagtttgagtcttctcttgaggctattagtataacttacagt
gaattagaaggtcagttaagaatatcaagggaagaattggggatttcagattttaaagaa
aaagtggaagaaataaatcaaaaagagagggaaatagaaggcctgaggaatgaaatagag
aattttaaaaatacgattgaagaattgacaaataaaaaggaaaccctttcaaacaatctc
aatgctctttcaataaggaaaggacagatagaggaaataggtaaggaaaaaagtaaaaac
cttcgggagaggcagcaggagtttgattctttatcagaaggtagagacatagaagaatat
ttaaaagagattcagtataataaagaaaaaattacaaaaatggagagtgttttaaaagaa
actttagaaaaggcaagaaaggataaacaaaatatagagagtaaaaagatatctgcctgt
aagagtcgggaccttttaaataatatgtttagggaacaaagtgaaaaattagaaaatgct
ctattagaaaagggatttaaggataaaaaagaggctttggagtatttattagacagtgaa
aatattaaaaaaattgaggaagaaattaagaattttgaaaatgaatatgtatctgtaaac
aaaagtatagacagactgatggagatattaaaggggcagaaaattaatgaagaagaatgg
aatcaattagaagaaagcattaaagggttggaacaggtcttaaacgaaaaaaggaaggaa
ataggcgctacagaaaaggctatttcagatatgcaagagaatttgcaaaaagtagaagaa
tttacaaagcagaaaaaggaattagagcgtgtagtggatatattaaatgaattggacaat
ctttttcagggaaataaatttgtagattttattgccgcaagacagcttaaatatataacc
ttttttgcatcaaaaaggcttaaggaaataagcaggggaaggtatgcccttgagattgat
tcagacaacaattttgtaatgagagatgacttcaatggcggagtaagaaggtctgtagat
actttatctggcggtgaaacttttttgacatccctttctttggctttggctctttcttct
catatacaattaaagggaagagcacctttagaattctttttcttagatgaaggttttgga
agtcttgatgcggaacttttggatatagtgatgacctctttagaaaggcttaaaaaagac
aaaatggtagtgggcataataagccatgtagatgaattaaaaggcagagtacctgtaaaa
ctaattgttacaccacctgccgtctctggcgaagggagtaaggtgagaatagaatataca
tag
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