Thermofilum pendens: Tpen_0285
Help
Entry
Tpen_0285 CDS
T00446
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tpe
Thermofilum pendens
Pathway
tpe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tpen_0285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpe03021
]
Tpen_0285
Enzymes [BR:
tpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tpen_0285
Transcription machinery [BR:
tpe03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Tpen_0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ABL77695
UniProt:
A1RWW5
LinkDB
All DBs
Position
complement(249254..251920)
Genome browser
AA seq
888 aa
AA seq
DB search
MSTSTNPKIVAGIKFGILSPEMIRKIAVLRIETSELYDEEGFPIPGGLMDRRMGSIEPGA
VCQTCGNRFTNCPGHFGYIELARPVIHPSFAPYIAILLKATCNRCGRLKLPEEKINKAKK
RMEVYSAKWPSLKTKYANTLLKEAAKATVCPHCGAPQYKIRLDKPYTFYEEREEGLVKLT
PLEIWERLSRIPEGDLRVVGIDPKEARPEWMVLRVIPVVPPSVRPSITLESGDRSEDDLT
HKLVDIIRVNQRLKENIDAGSPSLVIEDLWNLLQFHVATYFDNELPGIPPARHRSGRPLR
TLAQRLKGKEGRFRGSLAGKRVDFSSRTVISPDPNLSINEVGVPIDVAKVLTVPEKVTPW
NIEKLRKLVINGPDVWPGANYIIKPDGSRIDLRYVKHREEISQTLKPGYIVERHLMDGDV
VLFNRQPSLHRISIMAHIVKVLPYKTFRLNLLVTIPYNADFDGDEMNLHVPQSEEARAEA
RELMLVQEHIMTPRYGAPIIGGLHDYISGSYLLTRKDALLDKKSALRLLYIGNNCDPLVE
PAIIKPGPYWTGKQIVSMFLPKGLNYVGRASVAPASGKCDEEYCENDGYVLIKDGKLLLG
VFDKQAIGAEKHGTVLHEIVREFGVEKAKELMDGMFKVFIAYLDMHGFTMGVDSVEIPRE
AEDDIREILQEAEKKVEDLIRQYESGELQPMPGKTRKETLEDLIMNVLAEARTRAGEVTS
KHLGLLNHAVIMAKTGARGSMLNLTQMAAVVGQQSVRGKRIERGYTGRALPHFVKGDLSP
LAKGFVYSSFRRGLSPVEFFFHAISGREGLVDTAVRTAQSGYMYRRLQSAMQDFYVSYDG
TVRNSEGMIIQFRYGEDSVDPARSDHGKPVDVDKLIKKVLTLRGEKRE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgagcacgaatcccaagatagtcgccgggataaagtttgggatactctctcca
gagatgatcaggaaaatcgccgtgctaaggatagagaccagtgagctctacgacgaggaa
ggcttcccgatacctggcgggctcatggatagaagaatgggatccatagagccgggagcc
gtctgccagacatgtggaaacaggttcacgaactgcccagggcactttggatacatagag
ctcgcgagacccgtgatacacccgagcttcgccccatacatagctatccttttgaaggct
acctgcaacaggtgcgggaggctcaagttacccgaggagaagataaacaaggctaagaag
cgcatggaggtgtactccgccaagtggccaagcctgaagacgaagtatgctaacacccta
cttaaagaggcggctaaggctacggtatgcccacactgcggcgccccccagtacaaaatc
agactggacaagccgtacacgttctacgaggagagagaggaagggctcgtaaagcttaca
ccgctcgagatatgggaaaggctttcgcgcataccggagggggacttaagggttgtaggg
atagaccccaaggaggctagacccgagtggatggtgctacgcgtcataccggttgtaccg
ccgtctgtacgcccgtcgataaccctggagagcggcgatagaagcgaggacgatctcacg
cacaagctggtcgacataatccgggtaaaccagaggttaaaggagaacatagacgccgga
tctccgtcgctagtcatagaggacctctggaacctactccagttccacgtagcaacgtac
ttcgacaacgagctccccgggataccccccgctagacacaggtcgggcagacccctcaga
accctcgcgcagcgccttaaaggtaaggaggggaggttcagggggagcctggccggcaag
cgtgtcgacttctcctctagaacagtgatctctcctgacccgaacctaagtataaacgag
gtgggcgttcccatagacgtagcaaaggttctaacggtcccggagaaagttaccccctgg
aacattgagaaactgaggaaactcgtcataaacggaccagacgtatggcccggggcgaac
tacataatcaagccggatgggtcgaggatagacttgagatacgtcaagcaccgcgaggag
atctcccagacgctaaaacccggctacatagtggagaggcacctgatggacggcgacgtc
gtactcttcaacaggcaaccctctctacacaggatctcgataatggcgcacatagtcaag
gtacttccgtacaaaaccttcaggcttaaccttctggtaacaattccctacaacgcggac
ttcgatggagacgagatgaaccttcacgtacctcagagcgaagaggcccgcgccgaggcg
cgggagctcatgttggtacaggagcacataatgacgcccaggtacggggctcccataata
gggggtctgcacgattacatctccggtagctaccttctaacgaggaaggacgccttgctg
gacaagaagagcgccttaaggctgctctacatcgggaacaactgtgacccgctggtggag
ccagccataattaagcccggaccctactggacggggaagcaaattgtcagcatgttcctc
ccgaaaggactgaactacgttggacgcgcaagcgttgcacctgcctctggtaagtgtgac
gaggagtactgcgagaacgacggctatgttttgatcaaagacgggaagctactgctcggt
gtctttgataagcaggccataggggcggagaagcacggtacggttctgcacgagatcgta
cgggagtttggagtcgaaaaagcgaaagaactcatggacggcatgttcaaggtattcata
gcttacctggacatgcacggtttcacgatgggggttgacagcgtggagatcccgagggaa
gccgaggacgatatcagggagatactgcaggaggcggagaaaaaggtcgaggacttgatc
aggcagtacgagagcggcgagctgcagcccatgcctgggaagacccgcaaggagaccctc
gaggacttgataatgaacgtgctcgcagaggcgaggactcgggcaggcgaagtcacgagt
aagcacctaggtctgctcaaccacgcggttataatggctaagacaggtgcgagaggaagc
atgctcaacttgacgcagatggcagcggtcgtcgggcagcagtcagttagagggaaacgg
atagagagaggatacaccgggcgagcgttaccacacttcgttaaaggcgacctctcgccg
ctcgctaagggattcgtttacagctcatttcgcaggggcttgtcccccgtggagttcttc
ttccacgcaatctccggaagagaaggactcgtagacacagccgtcaggactgcccagtcc
gggtacatgtaccgcagacttcagagcgcaatgcaggacttctacgtatcgtacgacggg
actgtcaggaatagcgaggggatgataatacagttcaggtacggcgaggacagcgttgac
cctgcgaggagcgaccacgggaaacccgtagacgttgataagttgataaagaaggtcttg
acactaaggggtgagaagcgtgagtga
DBGET
integrated database retrieval system
