Thermofilum pendens: Tpen_0286
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Entry
Tpen_0286 CDS
T00446
Name
(GenBank) DNA-directed RNA polymerase, subunit B'
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tpe
Thermofilum pendens
Pathway
tpe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tpen_0286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpe03021
]
Tpen_0286
Enzymes [BR:
tpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tpen_0286
Transcription machinery [BR:
tpe03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Tpen_0286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RUBY_RBDX
RNA_pol_Rpb2_45
YdjO
Motif
Other DBs
NCBI-ProteinID:
ABL77696
UniProt:
A1RWW6
LinkDB
All DBs
Position
complement(251931..255323)
Genome browser
AA seq
1130 aa
AA seq
DB search
MSSRAVQAKLSREDRWRVVKAYVDELGLVRQHLDSFNAFLERGLQEIVDEVGGIKVESQG
VEIKFGKIEVGQPTFREADGSDLALTPMIARLRNITYAAPLYLTMTLYVDGEERRTESVY
IGSLPIMVKSKKCVLYGLKSEDEIVKYGEDPYDPGGYFIVNGSERVIVMQEDLSVNRVLV
DYGGASGSVTHTAKVFSVAAGQRSPLTVERTKDGMIYASFPACPSKIPVVVLMRALGLKT
DQEIAYAIGNDPIIQQEFLPVLMEQSKIAATPEEALDYIGSRVSPGQPRNVRIERAQAVL
DENLLPHIGRGPAARISKAFFVGQMVSRLLELKLGMRGPDDKDHLANKRIRQAGELIAQV
FRSAFRQLVKEMTYSIERHTSKTRDINLVSIVRPDIITERLNHALATGNWVGGRTGVSQI
LDRTNYLSTISHLRRVVSPLSRTQPHFEARELHPTQWGRLCPVESPEGQNCGLVKHLALL
ATLSNGTDEKQVYDLLVGRLGVVPVEKTVGKNISGARVYLNGRLIGYVEDGKGLAETLRK
LRREGRISHEVNVAFYSHEYTVGGVKGRIEEVYVNCDAGRIRRPLIVVENGEPRLKHEHV
ELLRKGEWTWSDLIENGIVEYLDAEEEENAYIATDVSELTPQHTHLEIVPAAILGIIAMT
IPFIEYNQSPRNSYQAAMAKQSLGIPHYNFKLRMDPRMHVMYYPQKPLVKTRIFDLLPLD
NLPYGTNMVVAVLTGGGYNIQDAVVINKAAIERGMSRSVFFRTYEAEERRYPGGLEDRFE
KPSLEKDLLDVKPPQAYEAIDPVDGIAYVEAELYGGQAVVSRTSPPRFYTSTLEPRVMTK
RKDTSLLLRHGEKGIIDRVFIMESPGGIKLAKVRVRDLRPTELGDKFASRHGQKGVVGML
VPQEDMPFTEEGITPDLIINPHAIPSRMTVGQLLEAITGKAAALAGRRIDATAFEPPSLD
EIREILRSYGFRSDGKEVLYDGVTGEKLEAEIFIGVVYYEKLHHLVADKMHARARGRVQI
LTRQPTEGRAREGGLRFGEMEKDCLVGHGASMLLRERLLESSDKTTIWVCENCGYMGWFD
ARKNTPVCPVCGDKGRLSPVEVSYAFKLLLQELTGLGLSVRLILKDKIQS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcgcgccgtgcaggcaaagctatccagggaggataggtggagagtggtaaaa
gcatacgtagacgagctaggcctcgtcaggcaacacttagactccttcaacgcttttcta
gagcgtggactccaggagatagtggacgaggtcggcggtatcaaggttgagtcgcagggt
gttgagataaagtttgggaaaatagaggttggtcagcccacgtttagggaggctgacggt
agcgatctcgctttgacacctatgatagcaaggctgagaaacataacctacgcggcaccg
ctctaccttacaatgacgctctacgtcgacggggaggagaggcggacggagtccgtctac
ataggtagtctgcccataatggtgaaaagcaagaagtgcgttctctacggtctcaagtcg
gaagacgagatagttaagtacggcgaggacccgtacgaccccggagggtacttcatcgtt
aacggctctgagagagtaatcgtgatgcaggaggatctgtcggtgaacagggttctcgtg
gactacggcggcgctagcggctccgtcacgcatacagcaaaggttttcagcgttgccgct
ggccaaaggtcgccgcttacagtcgagagaacgaaggatgggatgatatacgcctccttc
ccggcttgcccgtcgaaaataccagtagtagtgttgatgcgcgcgctgggtctaaagacg
gaccaggagatagcctacgccataggcaacgatccgataattcagcaggagtttctgccc
gtattaatggagcaatcgaagatcgccgctacgcccgaggaggctctcgactacataggc
tccagggtgtccccgggccagccgagaaacgtgaggatagagagggcgcaagccgttcta
gatgaaaacttgttgccgcacataggtagaggccccgctgctaggatttctaaggctttc
ttcgtggggcagatggtttcccggttgctcgaactcaagctcggcatgcgcgggcccgat
gataaggatcacctcgcgaataagaggatacggcaggccggcgagctgatagcgcaggtg
ttcaggagcgcgtttagacagctagtaaaagagatgacttactccatcgagaggcacact
tccaagactcgggatatcaacctggtgagtatagtcaggccggacataattaccgagagg
ttaaaccacgcactcgcgactggcaactgggtgggcggcaggacgggtgtgagccagatt
ctggacaggacgaactacctctcgacaatctcccacttgaggagggttgtctcgccgcta
tccaggactcagccgcacttcgaggctagggagcttcacccgacgcagtggggcaggctt
tgccccgtagaaagccccgaggggcagaactgcggcttggtaaagcacttggcgcttctg
gctactctctcgaacgggacggacgagaagcaggtgtacgacctgctggtaggcaggctg
ggagtagtccccgtggagaagacggtggggaagaatatctcgggggctagggtctacctc
aacgggcggctcataggctacgttgaggacggcaagggtctcgcggagactttgaggaag
cttcgaagagagggaagaataagtcacgaggtcaacgttgccttctattctcatgaatac
accgtcggcggggttaagggtaggatagaggaggtttacgtcaactgcgacgctgggagg
atacgaagacctctgatagtagtcgaaaacggtgaaccgaggcttaaacacgaacatgta
gagctgttgaggaaaggcgagtggacttggagcgacctcatagagaacggcatagtcgag
tacctagacgcagaggaagaggagaacgcctacatagctacggatgtgtccgagctaact
cctcagcacactcacctcgagattgtcccggcggcgatcctaggcattatcgcgatgacg
ataccctttatcgagtacaatcagtcgccgagaaactcgtatcaggcggcgatggctaag
cagtccctgggaataccgcactacaacttcaagctccgcatggaccccaggatgcacgtg
atgtactacccccagaaaccgctcgtgaagactcgcatcttcgacctgctacccttagac
aacctgccctacggcacaaacatggtggtagcggttctgacaggcggaggatacaacatc
caggatgcggtggtcatcaacaaggctgcgatagaaagaggcatgtcgaggtccgtcttc
tttagaacatacgaagccgaggagaggaggtatcccggtgggctcgaggataggttcgaa
aagccctccctagaaaaggaccttctagacgttaagcctcctcaggcttacgaggctata
gaccccgtggacggcatagcctacgtggaggcagagctctacggcggtcaagctgtggtg
agtaggacgagcccgccgcgcttctacacgagcaccctggaacctagggttatgaccaag
agaaaggacacctccctactcctgcgacacggtgaaaaagggataattgaccgcgtcttc
ataatggagagccccggaggcataaagctcgccaaggtaagagtgagagatctgcgcccc
acggagctcggggataagttcgcctcgcgccatgggcagaaaggcgtcgtagggatgctt
gtaccacaggaagatatgccgttcacggaagaggggataacccctgacctaataatcaac
ccgcacgctattccttcgaggatgaccgtcggacagctactcgaggcgataacggggaag
gctgccgcgctcgccggtaggaggatcgatgctacggcttttgaaccgccgtcgttagat
gagataagagagatactcaggagctatggcttcaggagcgacgggaaagaggttctctac
gacggggttaccggggagaagttggaggccgagatatttatcggtgtcgtgtactacgag
aagctacaccacctcgttgccgacaagatgcacgcgagagccaggggtagggtacagata
ctaacgcggcaacccacggagggtagagcgcgggaaggaggtctgaggttcggcgagatg
gagaaggactgcctagtcgggcacggagcctccatgctccttagagagcgtctcctcgaa
agctcagacaagactacgatatgggtttgcgagaactgcggctatatggggtggttcgac
gcgaggaagaatacccccgtatgccctgtctgcggcgataagggaaggcttagccccgtc
gaggtatcctatgcgtttaagctacttttgcaggagcttacggggctagggctctctgtg
cgactgatccttaaagacaaaatccagtcgtga
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