Thermofilum pendens: Tpen_0311
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Entry
Tpen_0311 CDS
T00446
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpe03016
]
Tpen_0311
Enzymes [BR:
tpe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Tpen_0311
Transfer RNA biogenesis [BR:
tpe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Tpen_0311
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Sen15
Motif
Other DBs
NCBI-ProteinID:
ABL77720
UniProt:
A1RWZ0
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All DBs
Position
complement(277524..278105)
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AA seq
193 aa
AA seq
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MEKGQEVAKISGEGVFDGRIVRVLDKEFAEQLYQRGYGMLSGEILELTLVEAAYLVYREM
LKVKDDQGRTLSFPEIVRLASNFDPDFWVKLNVYTDLRNRALPAKPGVNPYEFLVDWKKK
GKPRRLLVRILREGTRVSFPEFEDMFRRALESDRELVIAIVDKEGVVTYYTVEGGSYEQV
GASVEDNFEVPSE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagggtcaggaggtcgcgaagattagcggggagggggtgttcgacgggaggatc
gtcagggtgctcgacaaagagttcgcggagcaactgtaccagcgtggctacggtatgcta
agcggggagatcttagagcttacactagtagaggcagcgtacctcgtttaccgcgagatg
ttgaaggttaaagacgaccaaggaaggactttatcgtttccagagatcgttaggctggcg
tcgaattttgacccggacttctgggttaagctgaacgtctacacggatttgagaaacagg
gctctcccagcgaagccgggagtaaacccctacgagttcctggtggattggaagaagaag
gggaagccgaggaggctcctagtgaggatccttagggaggggactcgtgtgagcttcccg
gagttcgaggacatgtttcgcagggctttagagagcgatagggagttggtgatcgccatt
gtagataaggagggtgtggttacctattacacggtggagggtggtagctacgagcaagtc
ggggcaagcgttgaagataacttcgaggtaccttctgagtaa
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