Thermofilum pendens: Tpen_0377
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Entry
Tpen_0377 CDS
T00446
Name
(GenBank) rRNA 2'-O-methyltransferase fibrillarin
KO
K04795
fibrillarin-like pre-rRNA processing protein
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpe03009
]
Tpen_0377
Ribosome biogenesis [BR:
tpe03009
]
Prokaryotic type
Sno RNPs
Box C/D snoRNPs
Tpen_0377
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-ProteinID:
ABL77786
UniProt:
A1RX56
LinkDB
All DBs
Position
342454..343155
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AA seq
233 aa
AA seq
DB search
MIRPVKVVEHEKFPGIYVVEYEDGTKKLATVNLAPGVKVYDETLIQHGDKELRTWNPYRS
KLAGAIHKGITINPIKPGVKVLYLGVASGTTPSHVSDIIGPKGVLFGVEFAPRVMREFIE
KVAVHRENVVPLLADARFPTKYAHVVELVDVVYADIAQPFQAKYVADNADMFLKSGGYIM
MAIKAMSIDVTATPSETYKREITHLEERGYKVKEVKHLEPYDEAHAFVVAQKP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgattaggcctgtaaaagtggtggaacacgagaaattcccaggaatatacgtcgtggag
tacgaggacgggaccaaaaagttggcaactgttaacctggctccaggcgtaaaggtttat
gatgaaacactaatccagcacggcgacaaagagctcagaacatggaatccttatagaagc
aagctagccggcgccattcataaggggataaccattaacccgataaagcccggcgtcaag
gtcctctacttgggggtagcctctggaaccacgcctagccacgtctccgacataatcgga
cctaaaggtgttctcttcggcgtagagttcgctccgcgcgttatgcgtgaattcatcgag
aaggtagcagttcacagggagaacgtagttccactcctcgccgacgccaggttcccgacg
aagtacgcgcacgtagttgagctggtcgacgtcgtatacgccgacatagcgcaacccttc
caggcaaagtacgttgcggacaacgcggatatgttccttaaaagcggagggtacattatg
atggctataaaggctatgagtatagacgtaaccgcgaccccctcggagacgtataagagg
gagataactcacctagaggaaagaggctacaaagtaaaggaggtaaagcacctagaaccc
tatgatgaggctcacgcatttgtagttgcccagaaaccctaa
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