Thermofilum pendens: Tpen_0405
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Entry
Tpen_0405 CDS
T00446
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tpen_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpe03021
]
Tpen_0405
03019 Messenger RNA biogenesis [BR:
tpe03019
]
Tpen_0405
Transcription machinery [BR:
tpe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Tpen_0405
RNA polymerase I system
Tpen_0405
Messenger RNA biogenesis [BR:
tpe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Tpen_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
GPKOW_C
Motif
Other DBs
NCBI-ProteinID:
ABL77814
UniProt:
A1RX84
LinkDB
All DBs
Position
complement(370641..371114)
Genome browser
AA seq
157 aa
AA seq
DB search
MAEKPPSPLRFYALRVTSGQEYNVAQLLYRRAASGKYKVYSILVVPGLKGMVFVESDALY
EAQRLAYGLKHVRGVVRGAVSLQEMEGLLKPKPLVDQLNVGDFVEIIRGPFTGMRGRIVG
IDKSRNEVKVELAEAVFVLPVTINADDIKVIKRGGEA
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
ttggctgagaaacccccctctcctcttagattctacgccctaagggtcacgtccggccag
gagtacaacgtggcgcaactgctctacagaagggctgccagcgggaagtacaaggtttac
tcgatcctcgtggtaccgggcttgaagggcatggtcttcgtagagagcgatgctctctac
gaggctcagaggctagcctacgggcttaagcatgtcagaggagttgtaaggggtgctgtt
agcctgcaggagatggagggtttgctgaagcctaagcctctcgtagaccagttaaacgta
ggagacttcgtcgagatcattcgaggaccgtttaccggtatgcgcggcaggatagtcggt
atagacaagtccaggaacgaggtgaaggtagagctcgcggaggcggtcttcgtgctaccg
gtcacaatcaacgccgacgatatcaaggtcataaagcgtggaggagaagcgtaa
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integrated database retrieval system
