Thermofilum pendens: Tpen_0461
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Entry
Tpen_0461 CDS
T00446
Name
(GenBank) putative rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpe03016
]
Tpen_0461
Enzymes [BR:
tpe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tpen_0461
Transfer RNA biogenesis [BR:
tpe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tpen_0461
Prokaryotic type
Tpen_0461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
ABL77870
UniProt:
A1RXE0
LinkDB
All DBs
Position
complement(421558..422574)
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AA seq
338 aa
AA seq
DB search
MPAKYLAATPSREIYVRSEDETDFSYGWLPEERPPEVLLKYSVINLDKPVGPSSHEVVAW
LRKLLGIERIAHAGTLDPKVSGVLPITLNNAVRVLPVLLKEDKEYVCVMRLHGDVDPERL
ERVVSMFKGRIYQRPPLRSAVKREVRIRQIYDIRLLEFNERTALLHVWCEAGTYMRKLCH
DIGEILGVGAHMQELRRIRSGSLYEDRNCSTMHDVVDAYYIWKERGIDHFLRQVFLPVEA
AIQHLPKVWIRDSAVDAVCHGAPLAVPGIVKLEGGIKVNSTVAILTLKGELVAIGKAQMT
TEKMLTESSGIAVKTEHVVMDPGTYPRKWKSHKEASGP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccaagtaccttgcagcgaccccttcccgcgagatatacgtgaggtccgaagac
gagacggatttttcctacgggtggctcccagaagagcgaccgccggaagtactcctcaag
tactccgtcataaacctagacaaacccgtgggaccctcaagccacgaggttgtagcgtgg
cttaggaagctcctagggatagagagaatagcccacgctggcacgctggatccaaaggtt
tccggggttcttcccataacgttgaacaacgctgtacgcgtactacctgtgctgctaaaa
gaggacaaggagtatgtgtgtgtaatgaggctgcacggcgacgtcgacccggaaaggctt
gaaagagtagtcagcatgtttaaaggcaggatttaccagaggccaccgctaaggtctgct
gtgaagagggaggttcgaataaggcagatctacgatattaggcttttagagtttaacgag
aggactgccctcctccatgtctggtgcgaagctggaacctacatgcgtaagctgtgccac
gatatcggagagatactcggtgtcggggcgcacatgcaggaacttagaaggatcaggtct
gggagtctctatgaggacaggaactgctctacgatgcacgacgtcgtggacgcgtactat
atctggaaagagagagggatagaccactttctacggcaagtctttctgcctgttgaagca
gcgatccagcatcttccaaaagtatggattagagactccgcggtagatgctgtatgccat
ggagcccctctggctgtccccgggatagtaaagctagagggaggtataaaggtgaacagc
acagtggctattctcacgctgaaaggcgagctagtagccatcgggaaagcgcaaatgacc
acggagaagatgcttacagagtctagcgggattgccgtgaaaacggagcacgttgtcatg
gatccggggacctacccaaggaagtggaagtcccataaggaggcctcaggcccctag
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