Thermofilum pendens: Tpen_0556
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Entry
Tpen_0556 CDS
T00446
Name
(GenBank) eRF1 domain 3 protein
KO
K06965
protein pelota
Organism
tpe
Thermofilum pendens
Pathway
tpe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Tpen_0556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpe03019
]
Tpen_0556
Messenger RNA biogenesis [BR:
tpe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Tpen_0556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
LAGLIDADG_3
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
ABL77962
UniProt:
A1RXN2
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All DBs
Position
complement(504578..505591)
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AA seq
337 aa
AA seq
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MVEVLEDLYYLFLLVRKGDVVYGWTTRQLRIERATGEERGERIPVYLGVEVEKVSYAKFS
EKLRFTGRVVEAPEEVYAKGSFHTIQVGVGDRVKIVKKSGIDGFTRNILEKAASKIRRVL
LISVGDEEVAVGYLSPVGVEVRAVVGYSPVGRGKESSLDERYREPIASIVQRIFESGRAE
HVDEVVVAVNERLAEVVSRVLGELGVKARVVKVSEGGEAGIYELLRGGQSRELLSSVRLP
LELAEVERVLQELFSGKGKAVAGLENVEKVAEWGIVKTLIVSDALLFGEESRERVLKVLG
EVFSRNGKIFIVPEESEAGRKLKPFGGALAELYYSLE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaggtattagaggatctctactacctgtttctactcgtacgtaaaggtgacgta
gtctatggttggactacgcgccagttgaggatcgagcgggccacgggcgaggagcgcggc
gagaggattccagtctacctcggagtagaggtggagaaggtctcctacgccaagttctcc
gagaagctgaggttcacgggaagggttgtcgaggcgcccgaggaggtttacgcgaaggga
tcgtttcacacgatacaggtgggggttggagaccgcgttaagatcgtgaagaagagcggg
atagacggatttacgagaaacatccttgaaaaggctgcgtcgaagataagaagagttctt
ctgatcagcgtcggtgacgaggaggtggcggtcggctacctttctcccgtaggcgtcgag
gtaagagccgtggttggctattcgcctgtaggcagagggaaggaaagcagcctcgacgag
cggtatagagaaccaatagcgtctatagtgcagagaattttcgagagcgggagagctgaa
catgtagacgaggtggtggtcgcggttaacgagagacttgcggaagtggtttcaagagta
ttaggggagctcggcgttaaggctagggtcgtcaaggtatcagaaggtggggaagcgggg
atctacgagctgctcaggggcggtcaatcaagggagctcctgagctccgtccgcttaccc
ctcgagctcgcagaggtagagagagtgctccaggagcttttcagcggtaagggcaaggcg
gtcgctgggcttgaaaatgtcgagaaagtagccgagtgggggatcgtcaagacgctcata
gtgtcggatgcgttgttattcggcgaggagtctagggagagagtactcaaagtcttaggc
gaagttttttcccggaacggcaagatattcatagtacccgaggaaagcgaggcaggccgc
aagctaaaaccatttggaggagctctggccgagctctactactctctcgagtag
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