Thermofilum pendens: Tpen_0557
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Entry
Tpen_0557 CDS
T00446
Name
(GenBank) Suppressor Mra1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tpe
Thermofilum pendens
Pathway
tpe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tpen_0557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpe03009
]
Tpen_0557
Enzymes [BR:
tpe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
Tpen_0557
Ribosome biogenesis [BR:
tpe03009
]
Eukaryotic type
90S particles
Other 90S particles
Tpen_0557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ABL77963
UniProt:
A1RXN3
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All DBs
Position
complement(505633..506331)
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AA seq
232 aa
AA seq
DB search
MKKLVLVLADAGLELVPRELWSHPAVKSHAKRRGKNPGRMLLDISVHYAAMKTLNEYWKR
GRPDIVHVSLLVAQDSVLNRLGYLHTVIHTYDGKLVELDPSMVVPRNYNRFVGLFEQLLE
KGQVPPGSEKPLAKLRTGRNLGEVLKEMGVDAVYRLSEKGEPVKPLDLARRIAGSDVPAV
IIGAFQRGEFSKEVLSIEAEEYSIFREALPAWTVVAEVVVSLEHVSVWGASH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttggtcctagtattggcggacgccgggctagagctggtaccgagggagctc
tggagccacccagccgtgaagagccatgcgaagcggcgcggcaaaaacccaggaaggatg
ctgctggacatctcggtgcactacgcggcgatgaagacgcttaacgagtactggaagagg
ggtcgaccggacatagtgcacgtttccctcctggtggcccaggactccgtgctcaacagg
ctaggctacctgcataccgttatacacacgtacgacggtaagctcgtcgaactggacccc
agcatggtggttccgaggaactacaacaggttcgtggggcttttcgaacaactactagag
aagggacaggtaccgccgggctccgagaagcctctcgcgaagctacgcacggggagaaac
ctcggcgaagttttgaaagagatgggtgtggacgccgtgtacaggcttagcgagaaaggc
gagcccgtaaagcccttagacctcgctaggaggattgccggctcagacgtgccggccgtg
ataataggagcattccagaggggggagttcagcaaggaagtgctcagcatcgaagcagag
gagtactccatattccgcgaagccctccccgcgtggacggtggtcgcggaggttgtagtc
tcgctagaacacgtatcggtgtggggtgcctcgcattga
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