Thermofilum pendens: Tpen_0561
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Entry
Tpen_0561 CDS
T00446
Name
(GenBank) protein of unknown function DUF402
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpe03009
]
Tpen_0561
Ribosome biogenesis [BR:
tpe03009
]
Prokaryotic type
rRNA processing factors
Tpen_0561
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ABL77967
UniProt:
A1RXN7
LinkDB
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Position
508524..509999
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AA seq
491 aa
AA seq
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MIRVRGIHSTAIAGLLDEAGFRFADLSQELLARIPQLRVEERVLVTVKDTDDRSGVVVLG
DRAVVEKVAYLLRAVIPGALVSYVGEGPYTTYAVRLLSRVEGDVYEAEYSPGKRTTVKLR
RPHVEGEVIMAHVIRASPEAPLLKEGVAITGSLVRLVQFDRHSVSEHIRDENLRLQLLTL
AMTSAPTGWGVHFRSASKRASIVDVMAEIKALSEKAEKILKEVAPKEPGVVVPGEAIAIV
EIPADASIRMDALRSRYYPTLPLHHLLKRLGDDELSRAVDFSERLLAGCEKCLSSTGAIE
VFLERLSSLKGRQVSVLHRKVAGAGHVWSAEVESVKRMTVVLKRVVSSPGLYDGFEGLKR
EPGDVIRSYTWLFGRAVVHFYTSARGELKGVYVNINAPVFFAGNANTLGYVDLGVDVTRA
ADEEPKVVDLAEFLDLVERGVLDKQLAGSYLEFAESVKHLLEKDIGEDLPARIMQAQKSI
FSFETDKLLAV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgattagagttagggggattcacagcacggcgatagcggggctcttggacgaggctggt
ttccgcttcgcggacctcagccaggagctcctggcgcgtatcccccagctgagggtggag
gaacgcgttctcgtcaccgttaaggacacagatgacaggagcggcgtagtagtactgggc
gaccgcgctgttgtcgaaaaagtggcatacctcctccgcgcggtcatcccgggagctcta
gttagctacgtgggcgaaggtccctatacgacgtacgcggtgaggcttctctcgagggtg
gagggcgacgtctacgaggcggagtattcgcccgggaaacgcacgacggtcaagcttcgt
cgccctcacgtagaaggcgaggtgataatggcccacgtgatcagggcctccccggaggcc
cccttgctaaaggagggggtggcgattacggggagcctcgtgaggctggtacagttcgac
aggcacagtgtaagcgagcacatcagggacgagaaccttagactgcagctgttaacgctc
gctatgacgagcgcgccgacggggtggggtgttcacttcaggagtgcgtcgaagagggcg
agcatagtcgacgtaatggcggagattaaggctctaagcgagaaggccgagaaaatcctt
aaggaagtcgcgccgaaagagcccggcgtagttgttcccggtgaggcgatagcgatagta
gagatcccggcggacgcgtcgatacggatggatgcgcttcgatcgcgctactacccgacg
ctaccgctccaccaccttcttaagcggctgggagacgacgagctcagcagggctgtagat
ttctcggagaggctcctcgcaggttgcgagaagtgcctatcgagtacgggggcaatagag
gttttcctggagaggctctcctcgcttaaagggcgccaggtaagcgtgttgcacaggaag
gtcgcgggcgcaggccacgtttggagcgctgaagtggaaagcgtgaaaagaatgactgtc
gttttgaagcgtgtagtatcgtcgccaggtctatacgacggcttcgaaggcttaaagcga
gaacctggagatgttatccgctcatatacctggcttttcgggagggcggtcgtccacttt
tacacttcggcccggggagaattgaagggggtatacgttaacataaatgctccggtattc
ttcgccggcaacgctaacacccttggctacgtagacctaggggtagacgttacccgtgca
gcagatgaagagccgaaagtagtggatctcgccgagttcctagacctcgtggaaagaggg
gttctagacaaacagctagcaggtagctacctagagttcgcggagtccgtgaagcatctc
ttggaaaaggatattggggaagatctcccggctaggattatgcaggcacaaaaaagcata
ttttcatttgaaacggacaagctattagcagtgtga
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