Thermofilum pendens: Tpen_0619
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Entry
Tpen_0619 CDS
T00446
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpe03016
]
Tpen_0619
Enzymes [BR:
tpe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Tpen_0619
Transfer RNA biogenesis [BR:
tpe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Tpen_0619
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
ABL78023
UniProt:
A1RXU3
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All DBs
Position
complement(575902..576417)
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AA seq
171 aa
AA seq
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MVVLDPLQGNQLYFKGGFYGRFFTVPKPKLPDVRKELELSLFDAMYLLEQGCLDLKREDG
SPVSPSELFELASRIYENFYDAYAVYKDLRGRGYVVKSGMKFGSTFAVYQFGPGIDHSIF
LVDVLKYNDKLDPIQIIRAGRLSHSVRKHFILAYRDPVDGKIQYFSFRWLM
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggtagtactggatcctcttcaaggaaaccagttgtacttcaaaggaggtttctacgga
cgcttcttcacggtgcccaagccgaagctcccagacgtacgcaaagagctagaactgtct
cttttcgacgcaatgtaccttctggaacagggctgcctagaccttaaaagagaggacggg
agccctgtttctccctcggagcttttcgagcttgcatccagaatctatgaaaacttctac
gacgcttatgctgtttacaaggacctgaggggaagaggctacgtagtgaagtcgggaatg
aaattcggttccacgtttgccgtgtaccagttcggtcccggcattgaccactcgatcttc
ttggtggatgtcttgaagtataacgacaagcttgaccctatacagatcataagggctggg
agactttcgcattccgtgaggaaacacttcatactcgcttatagagacccggtagacgga
aagattcaatacttctcgtttaggtggcttatgtag
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