KEGG   Thermofilum pendens: Tpen_0624
Entry
Tpen_0624         CDS       T00446                                 
Name
(GenBank) monomeric archaeal DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
tpe  Thermofilum pendens
Pathway
tpe03030  DNA replication
tpe03410  Base excision repair
tpe03420  Nucleotide excision repair
tpe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tpen_0624
   03410 Base excision repair
    Tpen_0624
   03420 Nucleotide excision repair
    Tpen_0624
   03430 Mismatch repair
    Tpen_0624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpe03032]
    Tpen_0624
   03400 DNA repair and recombination proteins [BR:tpe03400]
    Tpen_0624
DNA replication proteins [BR:tpe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Tpen_0624
DNA repair and recombination proteins [BR:tpe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Tpen_0624
   MMR (mismatch excision repair)
    Other MMR factors
     Tpen_0624
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Tpen_0624
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 ELL DNA_pol3_beta_3 DUF7159 STD1
Other DBs
NCBI-ProteinID: ABL78028
UniProt: A1RXU8
LinkDB
Position
complement(580573..581316)
AA seq 247 aa
MVKFVFPDAREWKYIIESLATIVDEANFVASPEGLKLRALDPGRIAMVDLFIPSNLFEEY
SVDQETKISAVLDDIDKVLKRAKSDDKISFEVSQGRLIITLSGRAERRFKFPLIDIAGQE
LPSPKLNFTVAAKMLSDTFRDALKDASLVSESVKLKAEDESLWLLARSDKGEIESRFSIE
TGSLVEIDVKEAAEASYGIDFLDKIVSKAYRISDILGLRFATNMPLEMTFDIAGGGTLKY
LLAPRME
NT seq 744 nt   +upstreamnt  +downstreamnt
atggtgaaattcgtatttcctgatgcccgtgaatggaagtacataatagagagccttgca
acaatagtcgacgaggcaaacttcgtcgcatcgcccgagggactgaagctgagggcgctc
gaccccggacgtatcgccatggtcgacctcttcataccctcgaacctcttcgaagagtac
tcggtagaccaggagacgaagataagcgccgtcctagacgatatcgacaaggtcctcaaa
agggctaaaagcgacgacaaaatatccttcgaggtatcccagggcaggctgatcataacg
ctatccgggagagccgagagaaggtttaagttcccgttgatagatatagctgggcaagag
ctaccatcaccgaagcttaacttcacagtagccgctaaaatgctgagcgatacttttagg
gacgcgttaaaggacgcgtcgctcgtctcggagtccgttaagctcaaagcagaagacgag
tcgctgtggctactggccagaagcgataaaggagagatagagagccgcttctccatagag
acgggaagcctcgtcgagatagacgttaaagaggcggcagaggcgagctacgggatagac
ttcctggataagatagtgtcgaaggcgtacaggatcagcgatatactcggcctgcgcttt
gccacgaacatgcctctcgaaatgacgttcgacatagccggcggaggtacactgaagtac
cttttagctcctagaatggagtag

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