Thermofilum pendens: Tpen_0690
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Entry
Tpen_0690 CDS
T00446
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
tpe
Thermofilum pendens
Pathway
tpe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tpen_0690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpe03021
]
Tpen_0690
Transcription machinery [BR:
tpe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Tpen_0690
Prokaryotic type
Archaeal type
TFB
Tpen_0690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
TMP_3
Ribosomal_S27e
HTH_Tnp_ISL3
Zn_ribbon_3
Sigma70_r4
Auto_anti-p27
Trm112p
DUF2752
Zn_ribbon_IS1595
HTH_AsnC-type
Zn_ribbon_tTFIIB
DUF8106
Zn_ribbon_4
Zn_ribbon_PaaD
A2L_zn_ribbon
Lar_restr_allev
FtrD-like
Zn_Tnp_IS91
Zn_ribbon_LysW
Zn_Ribbon_Prim
FYDLN_acid
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
ABL78092
UniProt:
A1RY12
LinkDB
All DBs
Position
complement(640039..641022)
Genome browser
AA seq
327 aa
AA seq
DB search
MGFGRESMVEERKENVNPEDSEEERELRCPNCGSTRLIYDATRGEIICANCGYVMSEREI
DQGAEWRAFTPEEREKRSRVGAPISRYGVESLVTDIDWGGRDAAGREISLRKRIEMLRLR
KWQVRARAQSSMERNLAQAVIELERLGAQLGLPKAVLDRALDIYKSALDSNLVRGRSIES
VMAAAVYAACREMRLPRTLDEIALYTRAGRKDVARCYRLLLREASLKVPLPNAADFVPRI
GSLLRLSGATIKRAMEIIDQARNAGLTAGKDPAGLAAAAIYIAALQNGEMRTQKEVARAA
KVTEVTVRNRYKELVKKLDIKLPVSKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgggcgtgagagtatggttgaggaaagaaaagagaacgttaatccggaggat
tctgaggaagaaagagagctacgatgccctaactgcgggagcaccaggctaatctacgat
gctacgagaggggagattatatgcgcgaattgcggctacgtgatgagcgaaagggagatt
gaccaaggagcggagtggagggcattcactccagaggagagggagaagagaagcagggta
ggagccccgatctccaggtatggtgttgaaagccttgtcacagatatagactggggtgga
cgggacgctgcgggccgggagataagccttaggaagagaatcgagatgctacggcttagg
aagtggcaggtacgcgccagagctcagagctcaatggagagaaacctcgcccaggcagtg
atagagcttgagaggctgggagcacagctgggtcttcccaaagcagtcctggacagggct
ctcgacatatacaagagcgcactggacagtaacctggtacgcggaagatcgatcgagtcc
gtgatggcagcagcggtctatgcagcatgcagagagatgcggcttccgaggacgcttgac
gagatagcgctctacaccagagcaggcaggaaggacgtcgctcggtgctataggttgctc
ttgagagaggcatccttaaaggtgcccctacccaacgccgccgacttcgtgccgagaata
ggttccctgctacgcctctccggagctacgatcaagagagcaatggagataatcgaccag
gccagaaacgctggtctaaccgctggtaaggaccccgccgggctggcggccgccgcgata
tatatcgcggcgcttcagaacggagagatgcggacacaaaaggaggttgcgagggcagcc
aaggtcactgaggtcaccgtgaggaataggtacaaggagctagttaaaaaactcgacata
aagctccccgtatctaagaagtag
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