Thermofilum pendens: Tpen_0710
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Entry
Tpen_0710 CDS
T00446
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tpe
Thermofilum pendens
Pathway
tpe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tpen_0710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpe03021
]
Tpen_0710
Transcription machinery [BR:
tpe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Tpen_0710
Prokaryotic type
Archaeal type
TFE
Tpen_0710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
zf_UBZ
HTH_9
Zn_ribbon_SprT
DUF6758
Zn_ribbon_4
HypA
Lar_restr_allev
DUF8106
Ribosomal_aS21
IBR_1
DUF8617
DUF5817
Zn_ribbon_GTF2H2
DZR
Rrf2
HTH_5
DUF7129
zf-HIT
IBR
Zn_ribbon_LysW
Zn_ribbon_PaaD
DUF7560
WHD_RecQ_mid_bact
Zn_ribbon_IS1595
zf_DPOE_2
Ribosomal_S27e
Zn_ribbon_6
Sigma70_r3
DUF7558
CHP02642
ADK_lid
Cas12f1-like_TNB
zf-C2H2_3
Motif
Other DBs
NCBI-ProteinID:
ABL78112
UniProt:
A1RY32
LinkDB
All DBs
Position
660043..660579
Genome browser
AA seq
178 aa
AA seq
DB search
MNAHEALAEIAGKMFGDNAKKVMMVLASNVEVSDEDLAKDLKMDPPELRKLLNDLFEARL
VKYRRARDENIGWYKYYWRITDEPIQQILSDRKRLTLSILEKVLSLEENSETYVCPKCGT
RYTVDEAENNNYTCEVCGEVLEPFDNTHRVEKLKRAIELLGNWDPSPKQQASRAIPHA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacacgaagccttggcagagattgccggaaagatgttcggggataatgccaag
aaggtgatgatggttctcgccagtaacgttgaggtctccgacgaagacctggcgaaggac
ctgaaaatggatccgcccgagcttaggaagttgctcaatgatctcttcgaagcgaggctc
gttaagtaccggagagcgcgcgacgagaacataggttggtacaagtactactggcgtata
accgatgagccgatccagcaaatactcagtgataggaagaggcttacgctaagtattcta
gaaaaagtgctttcgctggaggagaactccgagacatacgtatgccctaagtgcggcaca
cggtacactgtggatgaggcggagaacaacaactacacgtgcgaggtatgcggcgaggtc
ctcgaacctttcgacaacacgcaccgagtcgagaaacttaagagggcgatcgaactacta
ggaaactgggacccctctccaaaacaacaagcatcgcgcgccatccctcatgcatga
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