Thermofilum pendens: Tpen_0798
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Entry
Tpen_0798 CDS
T00446
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpe
Thermofilum pendens
Pathway
tpe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tpen_0798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpe03400
]
Tpen_0798
Enzymes [BR:
tpe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Tpen_0798
DNA repair and recombination proteins [BR:
tpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tpen_0798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HbpS-like
Motif
Other DBs
NCBI-ProteinID:
ABL78200
UniProt:
A1RYC0
LinkDB
All DBs
Position
752550..753203
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AA seq
217 aa
AA seq
DB search
MSGKKPAGSNASCGDVLRALEEIAGEIAKCEKCPLSRSRTHTVPGEGNPCSGVVFIGEAP
GRNEDLQGRPFVGAAGALLTELISLAGLSREEVFITNVVKCRPPNNREPREEEIAACLPY
LLAQLRAIKPRLIVTLGKHSTKTILRMRGMSVDSIMSVRGKAYTVNAEWGQVTVFPTLHP
AAALYNPAMRKVLEEDFRFLRGLLEGGGQRTLDSWLG
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaagaagcctgccggtagcaacgcctcgtgcggggatgtgttaagagcgctc
gaagagatagccggagagatagcgaagtgcgagaaatgccctctcagcaggtctagaacg
cacacagtgcccggagaggggaacccctgctcgggagtagtcttcataggggaggctccg
gggaggaacgaggacctccagggaagaccattcgtcggcgcggccggcgccttgctcacg
gagctcatctccctcgcggggctttcgagggaagaggtcttcataacgaatgtcgtgaag
tgcaggcctcccaacaaccgggagcccagagaggaggagatcgcggcttgcctcccctac
ctcctcgcccagctcagagctattaagccgaggctcatagtgacgcttgggaagcacagc
acgaaaaccattctgagaatgcgcggtatgagcgtcgactcgataatgagcgttaggggt
aaagcctacacggttaacgcggagtggggacaggtaacggtgtttccgacactacacccg
gcagccgcgctctacaacccggccatgaggaaagttctcgaagaagacttccgcttccta
agagggctcctagagggaggcggccagaggacgctggactcatggctcggataa
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