Thermofilum pendens: Tpen_0885
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Entry
Tpen_0885 CDS
T00446
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpe03032
]
Tpen_0885
03400 DNA repair and recombination proteins [BR:
tpe03400
]
Tpen_0885
Enzymes [BR:
tpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tpen_0885
DNA replication proteins [BR:
tpe03032
]
Prokaryotic type
DNA Topoisomerases
Tpen_0885
DNA repair and recombination proteins [BR:
tpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tpen_0885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
ELYS
Motif
Other DBs
NCBI-ProteinID:
ABL78286
UniProt:
A1RYK6
LinkDB
All DBs
Position
832839..834734
Genome browser
AA seq
631 aa
AA seq
DB search
MSYKAVIVAEKNSVARAIASFLGGSSVRRFRVERVPAYEFLWEGGKHLSIGVSGHILDFD
FPEEYNKWESVDPRVLFFTNPVLVTREGAYIYVRALKTLARQTSTVILALDADVEGEAIA
FEVMRIMKSVNPELEFRRAWFSAVTKSDILEAFRKLREPNENLANKAFARMVVDLTIGAS
FTRILTLSARRNGGVMPRGSFLSYGPCQTPVLYLVVKRELEREQFKKKKYYVLRVRFRSQ
EGVFTASATFEDQEKAKSALDSVKRTGVGVVVSAEFNAVEVEPPVPLNTVYLESRASLFL
NLRPKETLSIAEKLYSFGYISYPRTETTIYPPTLNLRGIASMFTRWEDAGWYVAKVLAKG
FTPTRGREDDKAHPPIYPTRSASREEITRRFGEKAWKVYEYVVRHFLATISENAVVERQR
VVVKVGELSLQSEGRKLVYAGFYNVYKYSVPKDEPLPYVVEGEEVEVEDAKIEARTTQPP
PYLSESELLALMKKYGIGTDATMQEHIHTNIERRYFVVKNKRCIPTPLGRTLALALYETV
PELVLPEVRGKMEASLSKIATGERTPEEVVNEMRSEFLEYYDRLVERIDYVSKKIVEGLK
MVFQDEKQQARAGSVGEERSRSTRTHRKGKK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaaggcagtcatagtagcagagaaaaactctgttgcgcgtgcaatagccagc
ttcctaggcgggagtagcgtccggaggttccgcgtcgagagggtgcctgcctacgagttc
ctctgggagggaggaaagcacctatccataggcgtgagcgggcacatacttgacttcgac
ttccccgaggagtataacaagtgggagagcgtcgacccccgggtactcttcttcacgaac
cccgtgctcgtcactcgggaaggcgcgtacatctacgtcagagccttgaagactctggcc
cggcagacgtcgacagtgatactcgcgcttgacgcggacgtcgagggcgaggcgatagcc
ttcgaagtgatgaggataatgaagagcgtgaacccggagctcgagttccgtagagcgtgg
ttcagcgcggtgactaaaagcgatatactggaggctttcaggaagctgagggagccgaac
gagaacctggcgaacaaggcttttgctaggatggttgtagacctcacgataggtgcgagc
ttcacgcgtatactcactctctcggctaggaggaacggcggggtaatgccgaggggtagc
ttcctgagctacgggccatgccagacgccggtcctctacctggtggttaagagggagctc
gaaagggagcagttcaagaagaagaagtactacgtcttgagggtcaggtttaggagccag
gaaggcgtgttcacggcctccgccacgttcgaagaccaggagaaagcgaagagtgctctc
gatagcgttaagaggaccggcgtgggggtcgttgtatcagcggagttcaacgcggtagag
gtggagccccccgttcctctgaacacggtgtacctcgagagcagggcgagccttttcttg
aacctcaggcccaaggaaactctctcgatagcggagaagctttactccttcggctacata
tcctacccgagaaccgagaccacaatctacccgccgacgcttaacctgcgcggaatagcg
tccatgttcaccaggtgggaggacgccggctggtacgtagccaaggtgcttgcaaaaggc
ttcacgccgacgcggggacgggaagacgacaaagcccacccgcccatctacccgacgagg
agcgcgtcccgcgaggagataaccagaaggttcggcgagaaggcgtggaaagtctacgag
tacgtcgtcaggcacttcctagcaacgatcagcgagaacgcagtagtcgagaggcagagg
gtagtcgtgaaggtgggggagctctccctgcagtcggagggccgaaagctggtctatgct
ggtttctacaacgtctacaagtactccgtcccgaaggacgagcccttgccgtacgtcgtg
gaaggagaggaagtcgaagtcgaggatgcaaaaatcgaggcgagaaccacccagcctcca
ccctacctcagcgagtctgagctactcgccctgatgaagaagtacggcattggtacggat
gccacaatgcaggagcacatacacaccaacatagagaggagatacttcgtagttaagaac
aagcggtgcatacccacgcctctaggcaggactctcgccctggcgctctacgagaccgtc
ccggagctcgtactaccagaggtgcgcggcaagatggaagcctcactctcgaagatagct
actggcgagagaacccccgaggaagtcgtaaacgagatgcgtagcgagttcctggagtac
tacgaccgcctagtcgagcgcatagactacgtctccaagaagatagtagaggggctgaaa
atggtcttccaggacgaaaagcagcaagctcgagcaggctcagtgggcgaagaacgttcg
cgctccacgcgtacacaccgtaaaggtaaaaagtag
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