KEGG   Thermofilum pendens: Tpen_0930
Entry
Tpen_0930         CDS       T00446                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tpe  Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpe03400]
    Tpen_0930
Enzymes [BR:tpe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Tpen_0930
    5.6.2.6  RNA 3'-5' helicase
     Tpen_0930
DNA repair and recombination proteins [BR:tpe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Tpen_0930
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PhoH SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ABL78331
UniProt: A1RYQ1
LinkDB
Position
complement(876564..879230)
AA seq 888 aa
MSGKAISFATREYSKEEVLRVLDPLVAEWFSGKFEDLTPPQRYALIPIHEGKNVLVSSPT
GTGKTLTAFLIALSELFGMARRGELEDTVYVVYVSPLRALNNDIYRNLEEPLREIRELAE
KRGLEIPEIRHMVRTGDTSSSQRQSMLRKPPHILITTPETLAIILVAPKFREKLRSVKWV
IVDEIHSLAENKRGVHLALSLERLRELVGRDFVRIGLSATINPLEEVAQFLVGYNDDGSP
RECVIVDARYAKRKTLRVVSPVPDLVHTPAQEVTAKLYETLYEIVRKHRTTLIFTNTRSG
TERVVFHLKQLARKRGDIPEDAIAAHHSSLSRNVRLDVEEKLKRGELRAIVSSTSLELGI
DIGYIDVVVLVGSPKSVTRALQRIGRSGHRLHETSKGVFVCVDRDDLVEVAVMTREAYRH
HLDRVHIPRNALDVLAQHLVGMAIERKMSAEEAYRIVRRSYPYRDLPWEDFENVLKFLSG
GYGELEEYKVYGKIWYDPEEKVFGRRGKYARVIYTLNVGTIPDEVSVKVLTLDRKYVGNI
EEEFLERLMPGDRFVLGGKVYEFVKSDGLTAYVKPAYEQKPTIPAWFSEMLPLSYDLAVR
IGEFRGQAFEWISKPGGLERLKEYLKRECKVNEEGAEAVAGYFLEEYLFLRSLGVEKFPS
DRVVLVERYRDADGRVHHVFHTLFGRRTNDALSHALAYLASKRAGANIGIAVHDNGFALI
YPPGVEPQVSLMDVAPSELEDILKKAVFNTELMRRRFRHVATRGLMILRNYKGHEISVEK
QQLSAGTLLRVIRKWEDFPILKETFREILEDYMDIAHAREVLEKVHSGEIEVVDIGLLDT
PTPFAYNIILEGLSDVVLMEDKRALIAKFHEELMRKIARAKAQAQAAR
NT seq 2667 nt   +upstreamnt  +downstreamnt
gtgtctgggaaggcgatctccttcgccacgagggagtacagcaaggaggaagtgttgagg
gtacttgaccccctcgtcgcggagtggttttccgggaagttcgaggacttgacgccgccg
caacgctacgcgctcatacctatccacgaggggaagaacgtcctggtgtcgagccccacg
gggaccgggaagaccctgactgctttcctcatagcgttgagcgagctcttcggcatggct
aggagaggcgagctggaggacacagtgtacgtcgtctacgtctcgcccctcagggcgctg
aacaacgatatctacaggaacctcgaggagcctttgagggagataagggagctcgccgag
aagagggggctggagatccccgagattaggcacatggttaggacgggcgacacgtcgagc
tcccagcgacagagcatgctccgcaagcctccacacatactgataacgaccccggagacc
cttgcgattattctcgtcgcgccgaagttcagggagaagcttaggagcgttaagtgggtc
atcgtggacgagatacacagcctcgccgagaacaagcgcggggttcacctagccttgtcg
ctcgagaggctccgcgagctagtggggagggacttcgtgaggatagggttatcggcgacc
ataaaccccctcgaagaggtcgcgcagttcctggtggggtacaacgacgacgggagcccg
agggagtgcgtgatagtcgacgccaggtacgccaagaggaagaccctgagggtggtctcc
cccgtccccgacctcgtccacaccccggcgcaggaggtcaccgcgaagctctacgagact
ctctacgagatcgtgaggaagcacaggaccaccctgatattcacgaacactaggagcggc
acggagagggtagtcttccacttgaagcagttagcgaggaagaggggcgacatacccgag
gatgctatagcggcgcaccacagctcgcttagccgcaacgtcaggctggacgtcgaggag
aagctgaagaggggcgagctcagggcgatagtcagcagtacgagcctggagctcgggata
gacataggctacatagacgtcgtcgtcctggtcggctccccgaagtccgttacccgcgcg
ctacagaggataggtaggagcggccacaggcttcacgagacgagtaagggtgtcttcgtc
tgcgtggacagggacgacctcgtggaggtagccgtgatgacgagggaggcttacaggcac
cacttagacagggtccacataccgaggaatgccctagacgtcctggcgcagcacctggtc
gggatggctatagagaggaagatgagcgcggaggaggcgtacaggatagtgaggaggagc
tacccctacagggacctcccgtgggaggacttcgagaacgtattaaagttcctctcagga
gggtacggggagctggaggagtacaaggtctacgggaagatatggtacgaccccgaggag
aaggtcttcgggaggagggggaagtacgcgcgcgtgatctacacgctgaacgtcgggacg
atccccgacgaggtgagcgtgaaggtcctgaccctcgacaggaagtacgtgggcaacatc
gaggaggagttcctcgagaggctgatgcccggggataggttcgtgctcggcgggaaggtg
tacgagttcgtcaagagcgacgggctcacggcgtacgtgaagcccgcgtacgagcagaag
cccacgatacccgcatggttcagcgagatgctacccctcagctacgacctcgctgtccgc
ataggggagttcagaggacaggcgttcgagtggatctcgaagccggggggcctggagagg
ctcaaggagtacctgaagagggagtgcaaggtcaacgaggagggggccgaggctgtggct
ggctacttcctggaggagtacctgtttctgcggtccctcggcgtggagaagttcccgagc
gacagggtcgtgctggtcgagaggtacagggacgctgacggcagggtgcaccacgtcttc
cacacgctctttgggcgcagaaccaacgacgccttgagccacgcgctcgcgtacctagcg
tctaagagggctggggcgaacataggcatagctgtgcacgacaacgggttcgcgctgata
taccctccgggcgtggagccgcaggtatccctcatggacgtggcgcccagcgagctggag
gatatcctgaagaaggcggtgttcaacaccgagctcatgaggcgtaggttccgccacgtg
gctacccgcggcttaatgatactccgcaactacaaggggcacgagataagcgtcgagaaa
caacagctgagcgcaggcaccctgctcagggttataaggaagtgggaggacttcccgata
ctcaaggagacgttcagagagatactcgaggactacatggacatagcgcacgccagggag
gttctcgaaaaggtgcacagcggcgagatagaagtcgtggacatagggcttcttgacacg
cccactccgttcgcctacaacataatcctcgaggggctcagcgacgtcgtattaatggag
gataagcgcgcactcatcgcgaagttccacgaagaactaatgagaaaaatagccagagca
aaagctcaggcgcaagccgcgcgctag

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