KEGG   Thermofilum pendens: Tpen_1338
Entry
Tpen_1338         CDS       T00446                                 
Name
(GenBank) CRISPR-associated protein DxTHG motif
  KO
K19143  CRISPR-associated protein Csx1
Organism
tpe  Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tpe02048]
    Tpen_1338
Prokaryotic defense system [BR:tpe02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-U factors
    Tpen_1338
SSDB
Motif
Pfam: Csx1_CARF Csx1_HEPN
Other DBs
NCBI-ProteinID: ABL78735
UniProt: A1RZV5
LinkDB
Position
1290666..1292273
AA seq 535 aa
MSRVLVVATWGFPGNWLKERYSAAVPPANVDKWHRLSEWSIGGYVEAHSPTPVEAKALSE
MGFDVGVVVYALDSLSAVPRLSVPSDDDVRGKLVEELNKYVDGWLNKDPEGYGEVRGRAE
KVAGLFVSGYFGEVGFPLDKVSTVVLPGTGVYALGPGSKGKRYVFRGSPQNAAVAMELDL
LERVDAFKPDAVVFDSTHGINYLPIVAKRVVERVARVYSALEGRKVCVATVQSDTPAGGL
AGLELGVMVVDVKVFSASPREVLEELLPHFDSEPYRMLKKDEKVKPPDSLKELRKEFGEL
KEVKPLAKALVELAGYGLTLYLCSKVRELAGGDFSSMAGRLLERVRGALYERDVASGGEV
RVEHVYAFSDSVPGVLEAVYVLGRVVPRLAELCGVDEQGFMGVDRLLEVGRSLGLTRLGE
RLLGYEVSDVKRRVSAARDAGIELEGRVVPYAAVYDAVEGLLRKEGVGDSVRREAVEKFK
EILGRGVKCDVDARNFYAHAGLERNVVEVKVQGGSVYVRYREECMENVRSVVEKG
NT seq 1608 nt   +upstreamnt  +downstreamnt
gtgtccagggttttggtcgtcgctacgtggggcttcccgggtaactggctcaaagagcgg
tactcggccgctgttccgccggccaacgtcgataagtggcataggttgagcgagtggagc
attggaggctacgtggaggcccacagccctactcccgtggaggcgaaggctttgagcgag
atgggcttcgacgtgggggtcgtcgtctacgctcttgactctctgtccgctgttccgaga
ttgagcgttccctccgacgacgacgtcagggggaagcttgtagaggagctgaacaaatac
gtcgacgggtggttgaacaaggacccggagggttacggggaggttcgcgggagggccgag
aaggttgccgggcttttcgtctccggttacttcggggaggttgggttcccgctcgacaag
gtttccacggttgttctgccgggtacgggtgtgtacgcgctgggccccggtagtaagggt
aagaggtacgtgtttagggggtcgccgcagaacgcggctgtcgcgatggagctggacctg
ctcgagagggtcgacgccttcaagccggacgccgttgtcttcgactctacgcacgggata
aactacctgcccatagtcgcgaagagggttgtcgagagggtggctagggtttacagcgcg
cttgaggggaggaaggtctgcgtcgccaccgttcagagcgatactccggcgggcggcctc
gcgggcttggagctgggcgtcatggttgtcgacgtgaaggtgttcagcgcctcgcccagg
gaggtcttggaggagttgctcccgcacttcgactcggagccttacaggatgctcaagaag
gatgagaaggtcaagccgccggatagccttaaagagctgaggaaggagttcggggagctg
aaggaggttaaaccgctggcgaaggccttggtggagctcgccggctacggcttaacgctt
tacctgtgctcgaaggtgagggagctcgccggcggggatttctcctcgatggccgggagg
cttttagagagggtcagaggggcgctctacgagagggacgtcgcctccggtggcgaggtg
cgcgtggagcatgtctacgcgttcagcgactccgtgccgggcgtcttggaggctgtctac
gtgcttggacgcgtggtcccgaggctggcggagctgtgcggggtggacgagcaggggttc
atgggggttgacaggctcttggaggtggggaggtccctcgggcttacgaggctcggcgag
aggttgctgggctacgaggtgagcgacgttaagaggagggtttcggcggcgagggatgct
gggatagagcttgaggggagggttgtgccctacgcggctgtgtacgacgctgtggagggc
ctgctccgcaaggagggtgtcggggactcggttaggagggaggctgtggagaagtttaag
gagatcctcgggagaggggttaagtgcgacgtggacgcgaggaacttctacgctcacgcg
ggcctggagaggaacgtcgtggaggtcaaggtgcagggtgggagcgtctacgtgaggtac
agggaggagtgcatggagaacgtgagaagcgttgtggagaagggttga

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